RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 ZSWIM4Q9H7M6 989 aa15.49■□□□□ 0.07
ALPK3-201ENST00000258888 HMG20BQ9P0W2 317 aa15.49■□□□□ 0.07
ALPK3-201ENST00000258888 ZNF444Q8N0Y2 327 aaPredicted RBP15.49■□□□□ 0.07
ALPK3-201ENST00000258888 ASXL1Q8IXJ9 1541 aa15.49■□□□□ 0.07
ALPK3-201ENST00000258888 ZNF830Q96NB3 372 aaPredicted RBP15.49■□□□□ 0.07
ALPK3-201ENST00000258888 GTF2F1P35269 517 aaKnown RBP eCLIP15.49■□□□□ 0.07
ALPK3-201ENST00000258888 SPDYE4A6NLX3 237 aa15.49■□□□□ 0.07
ALPK3-201ENST00000258888 IL16Q14005 1332 aa15.49■□□□□ 0.07
ALPK3-201ENST00000258888 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
ALPK3-201ENST00000258888 HDAC1Q13547 482 aaPredicted RBP15.49■□□□□ 0.07
ALPK3-201ENST00000258888 CEP135Q66GS9 1140 aa15.49■□□□□ 0.07
ALPK3-201ENST00000258888 PAFAH1B1P43034 410 aa15.49■□□□□ 0.07
ALPK3-201ENST00000258888 BCCIPQ9P287 314 aaKnown RBP eCLIP15.49■□□□□ 0.07
ALPK3-201ENST00000258888 AMOTL2Q9Y2J4 779 aa15.49■□□□□ 0.07
ALPK3-201ENST00000258888 ANKRD36BQ8N2N9 1353 aa15.49■□□□□ 0.07
ALPK3-201ENST00000258888 IDEP14735 1019 aa15.48■□□□□ 0.07
ALPK3-201ENST00000258888 NEK1Q96PY6 1258 aa15.48■□□□□ 0.07
ALPK3-201ENST00000258888 CWC25Q9NXE8 425 aaPredicted RBP15.48■□□□□ 0.07
ALPK3-201ENST00000258888 ZSCAN22P10073 491 aaPredicted RBP15.48■□□□□ 0.07
ALPK3-201ENST00000258888 IDI1Q13907 227 aa15.48■□□□□ 0.07
ALPK3-201ENST00000258888 MAP2K1Q02750 393 aaPredicted RBP15.48■□□□□ 0.07
ALPK3-201ENST00000258888 CCDC40Q4G0X9 1142 aa15.48■□□□□ 0.07
ALPK3-201ENST00000258888 RNF187Q5TA31 235 aaPredicted RBP15.48■□□□□ 0.07
ALPK3-201ENST00000258888 ZFP91Q96JP5 570 aaPredicted RBP15.48■□□□□ 0.07
ALPK3-201ENST00000258888 SF3B2Q13435 895 aaKnown RBP15.48■□□□□ 0.07
ALPK3-201ENST00000258888 CHMP4BP1P59074 171 aa15.48■□□□□ 0.07
ALPK3-201ENST00000258888 HLTFQ14527 1009 aaKnown RBP eCLIP15.48■□□□□ 0.07
ALPK3-201ENST00000258888 MEIS3Q99687 375 aa15.48■□□□□ 0.07
ALPK3-201ENST00000258888 MFSD6Q6ZSS7 791 aa15.48■□□□□ 0.07
ALPK3-201ENST00000258888 DDX46Q7L014 1031 aaKnown RBP15.47■□□□□ 0.07
ALPK3-201ENST00000258888 CUL5Q93034 780 aa15.47■□□□□ 0.07
ALPK3-201ENST00000258888 BRF1Q92994 677 aa15.47■□□□□ 0.07
ALPK3-201ENST00000258888 CCDC91Q7Z6B0 441 aa15.47■□□□□ 0.07
ALPK3-201ENST00000258888 CTR9Q6PD62 1173 aa15.47■□□□□ 0.07
ALPK3-201ENST00000258888 CCDC12Q8WUD4 166 aaPredicted RBP15.47■□□□□ 0.07
ALPK3-201ENST00000258888 KIF5BP33176 963 aa15.47■□□□□ 0.07
ALPK3-201ENST00000258888 TTF1Q15361 905 aaPredicted RBP15.47■□□□□ 0.07
ALPK3-201ENST00000258888 CCDC102BQ68D86 513 aa15.47■□□□□ 0.07
ALPK3-201ENST00000258888 NCOA7Q8NI08 942 aa15.46■□□□□ 0.07
ALPK3-201ENST00000258888 SCLT1Q96NL6 688 aa15.46■□□□□ 0.07
ALPK3-201ENST00000258888 ZHX1Q9UKY1 873 aaPredicted RBP15.46■□□□□ 0.07
ALPK3-201ENST00000258888 GNG11P61952 73 aa15.46■□□□□ 0.07
ALPK3-201ENST00000258888 CCDC150Q8NCX0 1101 aa15.46■□□□□ 0.07
ALPK3-201ENST00000258888 RHPN1Q8TCX5 695 aa15.46■□□□□ 0.07
ALPK3-201ENST00000258888 CHPF2Q9P2E5 772 aa15.46■□□□□ 0.07
ALPK3-201ENST00000258888 TCERG1LQ5VWI1 586 aa15.46■□□□□ 0.07
ALPK3-201ENST00000258888 LRSAM1Q6UWE0 723 aa15.46■□□□□ 0.07
ALPK3-201ENST00000258888 CFAP65Q6ZU64 1925 aaKnown RBP15.46■□□□□ 0.07
ALPK3-201ENST00000258888 GOLGA6L10A0A0M3HER8 536 aa15.46■□□□□ 0.07
ALPK3-201ENST00000258888 HSP90AA4PQ58FG1 418 aa15.46■□□□□ 0.07
ALPK3-201ENST00000258888 POTEB2H3BUK9 544 aa15.46■□□□□ 0.06
ALPK3-201ENST00000258888 CAVIN2O95810 425 aa15.46■□□□□ 0.06
ALPK3-201ENST00000258888 ANO6Q4KMQ2 910 aa15.46■□□□□ 0.06
ALPK3-201ENST00000258888 RPGRQ92834 1020 aaKnown RBP15.46■□□□□ 0.06
ALPK3-201ENST00000258888 SYKP43405 635 aa15.45■□□□□ 0.06
ALPK3-201ENST00000258888 SMARCC1Q92922 1105 aaPredicted RBP15.45■□□□□ 0.06
ALPK3-201ENST00000258888 TCP11L1Q9NUJ3 509 aa15.45■□□□□ 0.06
ALPK3-201ENST00000258888 ANAPC15P60006 121 aa15.45■□□□□ 0.06
ALPK3-201ENST00000258888 UVSSAQ2YD98 709 aa15.45■□□□□ 0.06
ALPK3-201ENST00000258888 VAT1LQ9HCJ6 419 aa15.45■□□□□ 0.06
ALPK3-201ENST00000258888 USP48Q86UV5 1035 aa15.45■□□□□ 0.06
ALPK3-201ENST00000258888 CALML4Q96GE6 196 aa15.45■□□□□ 0.06
ALPK3-201ENST00000258888 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
ALPK3-201ENST00000258888 KLF18A0A0U1RQI7 1052 aa15.45■□□□□ 0.06
ALPK3-201ENST00000258888 PDE1AP54750 535 aa15.45■□□□□ 0.06
ALPK3-201ENST00000258888 DYNC1I1O14576 645 aa15.45■□□□□ 0.06
ALPK3-201ENST00000258888 PRPF4BQ13523 1007 aaKnown RBP15.44■□□□□ 0.06
ALPK3-201ENST00000258888 JADE2Q9NQC1 790 aa15.44■□□□□ 0.06
ALPK3-201ENST00000258888 UBA7P41226 1012 aa15.44■□□□□ 0.06
ALPK3-201ENST00000258888 PPP4R3AQ6IN85 833 aa15.44■□□□□ 0.06
ALPK3-201ENST00000258888 MAATS1Q7Z4T9 603 aa15.44■□□□□ 0.06
ALPK3-201ENST00000258888 GRIN2AQ12879 1464 aa15.44■□□□□ 0.06
ALPK3-201ENST00000258888 N4BP3O15049 544 aa15.44■□□□□ 0.06
ALPK3-201ENST00000258888 LDHAL6AQ6ZMR3 332 aa15.44■□□□□ 0.06
ALPK3-201ENST00000258888 TRMT1LQ7Z2T5 733 aaKnown RBP15.44■□□□□ 0.06
ALPK3-201ENST00000258888 XRCC6P12956 609 aaKnown RBP eCLIP15.44■□□□□ 0.06
ALPK3-201ENST00000258888 FAM114A1Q8IWE2 563 aa15.44■□□□□ 0.06
ALPK3-201ENST00000258888 FAM107BQ9H098 131 aa15.44■□□□□ 0.06
ALPK3-201ENST00000258888 MYO1BO43795 1136 aa15.44■□□□□ 0.06
ALPK3-201ENST00000258888 GIMAP7Q8NHV1 300 aa15.44■□□□□ 0.06
ALPK3-201ENST00000258888 CALCOCO1Q9P1Z2 691 aa15.43■□□□□ 0.06
ALPK3-201ENST00000258888 UBE4AQ14139 1066 aa15.43■□□□□ 0.06
ALPK3-201ENST00000258888 ADAMTS2O95450 1211 aa15.43■□□□□ 0.06
ALPK3-201ENST00000258888 GOLGA6L9A6NEM1 432 aa15.43■□□□□ 0.06
ALPK3-201ENST00000258888 TRIM47Q96LD4 638 aa15.43■□□□□ 0.06
ALPK3-201ENST00000258888 C14orf93Q9H972 538 aaKnown RBP15.43■□□□□ 0.06
ALPK3-201ENST00000258888 TSPY2A6NKD2 308 aa15.43■□□□□ 0.06
ALPK3-201ENST00000258888 LMAN1P49257 510 aa15.43■□□□□ 0.06
ALPK3-201ENST00000258888 ESYT1Q9BSJ8 1104 aa15.43■□□□□ 0.06
ALPK3-201ENST00000258888 TMCO5BA8MYB1 307 aa15.43■□□□□ 0.06
ALPK3-201ENST00000258888 NOP2P46087 812 aaKnown RBP15.43■□□□□ 0.06
ALPK3-201ENST00000258888 SPECC1Q5M775 1068 aa15.43■□□□□ 0.06
ALPK3-201ENST00000258888 ZSCAN16Q9H4T2 348 aaPredicted RBP15.43■□□□□ 0.06
ALPK3-201ENST00000258888 MAPKBP1O60336 1514 aa15.43■□□□□ 0.06
ALPK3-201ENST00000258888 HOOK3Q86VS8 718 aa15.42■□□□□ 0.06
ALPK3-201ENST00000258888 KIF20AO95235 890 aa15.42■□□□□ 0.06
ALPK3-201ENST00000258888 KAT14Q9H8E8 782 aa15.42■□□□□ 0.06
ALPK3-201ENST00000258888 SMC1AQ14683 1233 aaKnown RBP15.42■□□□□ 0.06
ALPK3-201ENST00000258888 ARHGAP45Q92619 1136 aa15.42■□□□□ 0.06
ALPK3-201ENST00000258888 ZNF219Q9P2Y4 722 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms