RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 CABP4P57796 275 aa15.83■□□□□ 0.13
TARDBP-201ENST00000240185 TBC1D9Q6ZT07 1266 aa15.83■□□□□ 0.13
TARDBP-201ENST00000240185 CALML4Q96GE6 196 aa15.83■□□□□ 0.13
TARDBP-201ENST00000240185 ZNF287Q9HBT7 754 aa15.83■□□□□ 0.13
TARDBP-201ENST00000240185 ZNF213O14771 459 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 MAP3K9P80192 1104 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 HS1BP3Q53T59 392 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 CTAGE1Q96RT6 745 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 UBA7P41226 1012 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 PSMC4P43686 418 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 CFAP58Q5T655 872 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 PPP4R3AQ6IN85 833 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 RPUSD2Q8IZ73 545 aaKnown RBP15.83■□□□□ 0.12
TARDBP-201ENST00000240185 JPH4Q96JJ6 628 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 SPAG5Q96R06 1193 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 SETDB1Q15047 1291 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 FERMT2Q96AC1 680 aa15.83■□□□□ 0.12
TARDBP-201ENST00000240185 PYM1Q9BRP8 204 aaKnown RBP15.83■□□□□ 0.12
TARDBP-201ENST00000240185 CLNS1AP54105 237 aaKnown RBP15.82■□□□□ 0.12
TARDBP-201ENST00000240185 MKNK2Q9HBH9 465 aa15.82■□□□□ 0.12
TARDBP-201ENST00000240185 SPG7Q9UQ90 795 aa15.82■□□□□ 0.12
TARDBP-201ENST00000240185 PTGS1P23219 599 aa15.82■□□□□ 0.12
TARDBP-201ENST00000240185 IQCA1Q86XH1 822 aa15.82■□□□□ 0.12
TARDBP-201ENST00000240185 FERMT1Q9BQL6 677 aa15.82■□□□□ 0.12
TARDBP-201ENST00000240185 LUC7L2Q9Y383 392 aaKnown RBP15.82■□□□□ 0.12
TARDBP-201ENST00000240185 IFIT3O14879 490 aaKnown RBP15.82■□□□□ 0.12
TARDBP-201ENST00000240185 ZWINTO95229 277 aa15.82■□□□□ 0.12
TARDBP-201ENST00000240185 IFIT1P09914 478 aaKnown RBP15.82■□□□□ 0.12
TARDBP-201ENST00000240185 ZSCAN22P10073 491 aaPredicted RBP15.82■□□□□ 0.12
TARDBP-201ENST00000240185 U2AF2P26368 475 aaKnown RBP eCLIP15.82■□□□□ 0.121e-10■□□□□ 10.2
TARDBP-201ENST00000240185 ARID4AP29374 1257 aaPredicted RBP15.82■□□□□ 0.12
TARDBP-201ENST00000240185 RFC1P35251 1148 aaPredicted RBP15.82■□□□□ 0.12
TARDBP-201ENST00000240185 SYKP43405 635 aa15.82■□□□□ 0.12
TARDBP-201ENST00000240185 RHOXF2BP0C7M4 288 aa15.82■□□□□ 0.12
TARDBP-201ENST00000240185 RARSP54136 660 aaKnown RBP15.82■□□□□ 0.12
TARDBP-201ENST00000240185 RHOXF2Q9BQY4 288 aa15.82■□□□□ 0.12
TARDBP-201ENST00000240185 CWC25Q9NXE8 425 aaPredicted RBP15.82■□□□□ 0.12
TARDBP-201ENST00000240185 PUF60Q9UHX1 559 aaKnown RBP15.82■□□□□ 0.12
TARDBP-201ENST00000240185 USP16Q9Y5T5 823 aa15.82■□□□□ 0.12
TARDBP-201ENST00000240185 ORC3Q9UBD5 711 aaPredicted RBP15.81■□□□□ 0.12
TARDBP-201ENST00000240185 RANBP6O60518 1105 aaKnown RBP15.81■□□□□ 0.12
TARDBP-201ENST00000240185 PCK1P35558 622 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 IARSP41252 1262 aaKnown RBP15.81■□□□□ 0.12
TARDBP-201ENST00000240185 TPD52P55327 224 aaPredicted RBP15.81■□□□□ 0.12
TARDBP-201ENST00000240185 TLDC2A0PJX2 215 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 AOPEPQ8N6M6 819 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 SSH1Q8WYL5 1049 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 DNAJC25Q9H1X3 360 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 ZSCAN16Q9H4T2 348 aaPredicted RBP15.81■□□□□ 0.12
TARDBP-201ENST00000240185 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 METTL24Q5JXM2 366 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 FAM184BQ9ULE4 1060 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 TUBBP07437 444 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 VAV2P52735 878 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 MAP7D1Q3KQU3 841 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 SYT10Q6XYQ8 523 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 PPP1R12CQ9BZL4 782 aa15.81■□□□□ 0.12
TARDBP-201ENST00000240185 SMIM23A6NLE4 172 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 VGLL3A8MV65 326 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 CCDC172P0C7W6 258 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 KRT13P13646 458 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 ATF3P18847 181 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 PRIM1P49642 420 aaKnown RBP15.8■□□□□ 0.12
TARDBP-201ENST00000240185 BMP2KLQ5H9B9 411 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 LMNTD2Q8IXW0 634 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 CAPZA3Q96KX2 299 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 AKAP2Q9Y2D5 859 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 TMPOP42166 694 aaKnown RBP15.8■□□□□ 0.12
TARDBP-201ENST00000240185 SPAG1Q07617 926 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 HDXQ7Z353 690 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 STMN2Q93045 179 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 CNPY2Q9Y2B0 182 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 A0A087WZG4 1122 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 KRT86O43790 486 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 FCHSD2O94868 740 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 SETSIPP0DME0 302 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 USP48Q86UV5 1035 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 CCDC63Q8NA47 563 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 SWAP70Q9UH65 585 aa15.8■□□□□ 0.12
TARDBP-201ENST00000240185 KIF5AQ12840 1032 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 RRAGBQ5VZM2 374 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 GPRASP1Q5JY77 1395 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 FGD6Q6ZV73 1430 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 ATP2A1O14983 1001 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 TMX3Q96JJ7 454 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 CCDC8Q9H0W5 538 aaPredicted RBP15.79■□□□□ 0.12
TARDBP-201ENST00000240185 DACT1Q9NYF0 836 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 PPFIA3O75145 1194 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 FAM160A1Q05DH4 1040 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 B4GALNT4Q76KP1 1039 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 CCDC110Q8TBZ0 833 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 IFT81Q8WYA0 676 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 STRN4Q9NRL3 753 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 RMND1Q9NWS8 449 aa15.79■□□□□ 0.12
TARDBP-201ENST00000240185 BTBD11A6QL63 1104 aa15.78■□□□□ 0.12
TARDBP-201ENST00000240185 KRT83P78385 493 aa15.78■□□□□ 0.12
TARDBP-201ENST00000240185 NFE2L2Q16236 605 aa15.78■□□□□ 0.12
TARDBP-201ENST00000240185 PABPN1LA6NDY0 278 aaKnown RBP15.78■□□□□ 0.12
TARDBP-201ENST00000240185 IGHMBP2P38935 993 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms