RNA–Protein interactions for RNA: ENSMUST00000177145.7

Cpsf6-208, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 3,819 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-208ENSMUST00000177145 Samm50Q8BGH2 469 aa9.91□□□□□ -0.82
Cpsf6-208ENSMUST00000177145 Zcrb1Q9CZ96 217 aaKnown RBP9.91□□□□□ -0.82
Cpsf6-208ENSMUST00000177145 Atp6v1dP57746 247 aa9.91□□□□□ -0.82
Cpsf6-208ENSMUST00000177145 Atp8b2P98199 1209 aa9.9□□□□□ -0.82
Cpsf6-208ENSMUST00000177145 Filip1lQ6P6L0 1131 aa9.9□□□□□ -0.82
Cpsf6-208ENSMUST00000177145 Ppm1eQ80TL0 749 aa9.9□□□□□ -0.82
Cpsf6-208ENSMUST00000177145 Mknk2Q8CDB0 459 aa9.9□□□□□ -0.82
Cpsf6-208ENSMUST00000177145 Stk36Q69ZM6 1316 aa9.9□□□□□ -0.82
Cpsf6-208ENSMUST00000177145 En2P09066 324 aa9.9□□□□□ -0.82
Cpsf6-208ENSMUST00000177145 Usp48Q3V0C5 1052 aa9.9□□□□□ -0.82
Cpsf6-208ENSMUST00000177145 Gm21698A0A087WQP8 267 aa9.9□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Zscan25B2RX31 543 aa9.9□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Gm21671G3UY31 267 aa9.9□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Snap23O09044 210 aa9.9□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Tnnt1O88346 262 aa9.9□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 St18Q80TY4 1045 aa9.9□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Noc3lQ8VI84 807 aaKnown RBP9.9□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Mkrn3Q60764 544 aa9.89□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Pnma3Q8JZW8 466 aa9.89□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Smarce1O54941 411 aaKnown RBP9.89□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 EvcP57680 1005 aa9.89□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Tshz3Q8CGV9 1081 aa9.89□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Dnajc14Q921R4 703 aa9.89□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Wdr78E9PYY5 807 aa9.89□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 E4f1Q8CCE9 783 aa9.89□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Kcnh4A2A5F7 1018 aa9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ccne1Q61457 408 aa9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Naa30Q8CES0 364 aa9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 KinQ8K339 391 aa9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Nckap5lQ6GQX2 1323 aa9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Adcy5P84309 1262 aa9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 HomezQ80W88 542 aa9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Kcnh5Q920E3 988 aa9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ccdc7Q9D541 371 aa9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Foxp4Q9DBY0 795 aaKnown RBP9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ift57Q8BXG3 429 aa9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Stac3Q8BZ71 360 aa9.88□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Mcmdc2E9Q956 681 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Arid4aF8VPQ2 1261 aaKnown RBP9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Magea1O89006 320 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Magea5O89009 320 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Hoxa7P02830 229 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Atp2b3Q0VF55 1220 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Cwc27Q3TKY6 469 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ddx19aQ61655 478 aaKnown RBP9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Rbm42Q91V81 474 aaKnown RBP9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Magea2Q9R2A2 320 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Eya1P97767 591 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Q3TQI7 289 aaKnown RBP9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 EappQ5BU09 281 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Pmfbp1Q9WVQ0 1022 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Disp3A3KFU9 1347 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Dlg5E9Q9R9 1921 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Tpx2A2APB8 745 aaKnown RBP9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Mindy4Q3UQI9 744 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Utp18Q5SSI6 552 aaKnown RBP9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Pdzrn3Q69ZS0 1063 aa9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Afg3l2Q8JZQ2 802 aaKnown RBP9.87□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ms4a2P20490 235 aa9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Erich4Q3UNU4 136 aa9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Zfp251Q6PCX8 632 aa9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Dnajc10Q9DC23 793 aa9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Col24a1Q30D77 1733 aa9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ppef1O35655 650 aa9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Strn4P58404 760 aa9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ginm1Q91WR6 327 aa9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Tjp1P39447 1745 aaKnown RBP9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Col15a1O35206 1367 aa9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Arhgap33Q80YF9 1305 aa9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ccdc96Q9CR92 584 aa9.86□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Atf5O70191 283 aa9.85□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Irx2P81066 474 aa9.85□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Unc5clQ6R653 518 aa9.85□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Jakmip1Q8BVL9 626 aa9.85□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Dennd6aQ8BH65 605 aa9.85□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Elmsan1E9Q2I4 1089 aaKnown RBP9.85□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 PsdQ5DTT2 1024 aa9.85□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Anp32cQ64G17 123 aa9.85□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ints3Q7TPD0 1041 aaKnown RBP9.85□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Grpel1Q99LP6 217 aa9.85□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ccdc173A0JLY1 547 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Brpf1B2RRD7 1212 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ppfibp2O35711 882 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Tbc1d30Q69ZT9 766 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Sgip1Q8VD37 806 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ccar2Q8VDP4 922 aaKnown RBP9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Rad50P70388 1312 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Ptgs1P22437 602 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Slx4ipQ9D7Y9 413 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Stk3Q9JI10 497 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Kcnq2Q9Z351 759 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Plch1Q4KWH5 1682 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Chpf2Q3UU43 768 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Cyp2d12Q8BVD2 504 aa9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 SrrtQ99MR6 875 aaKnown RBP9.84□□□□□ -0.83
Cpsf6-208ENSMUST00000177145 Bms1Q6PGF5 1284 aaKnown RBP9.83□□□□□ -0.84
Cpsf6-208ENSMUST00000177145 Sh3bgrQ9WUZ7 214 aa9.83□□□□□ -0.84
Cpsf6-208ENSMUST00000177145 Serpinb6bO08804 377 aa9.83□□□□□ -0.84
Cpsf6-208ENSMUST00000177145 Nxf2Q4ZGD8 691 aa9.83□□□□□ -0.84
Cpsf6-208ENSMUST00000177145 Mlh1Q9JK91 760 aa9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms