RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Ripor2Q80U16 1078 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Mtfr1lQ9CWE0 289 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 LratQ9JI60 231 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Magea2Q9R2A2 320 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Tbc1d8Q9Z1A9 1134 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Kndc1Q0KK55 1742 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Klrk1O54709 232 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Prkar2bP31324 416 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Chmp3Q9CQ10 224 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Ubr3Q5U430 1889 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Col22a1E9Q7P1 1613 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 EgfrQ01279 1210 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Tgfb1i1Q62219 461 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 CpvlQ9D3S9 478 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Zswim8Q3UHH1 1832 aaKnown RBP10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Pa2g4P50580 394 aaKnown RBP10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Cers3Q1A3B0 383 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Kiaa1211Q5PR69 1207 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Dpf1Q9QX66 387 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Foxo3Q9WVH4 672 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Zbtb22Q9Z0G7 638 aa10.44□□□□□ -0.74
Trim39-205ENSMUST00000173369 Lrp5Q91VN0 1614 aa10.43□□□□□ -0.74
Trim39-205ENSMUST00000173369 C4bP01029 1738 aa10.43□□□□□ -0.74
Trim39-205ENSMUST00000173369 Adora1Q60612 326 aa10.43□□□□□ -0.74
Trim39-205ENSMUST00000173369 Gpr150Q8BL07 427 aa10.43□□□□□ -0.74
Trim39-205ENSMUST00000173369 Fam213aQ9CYH2 218 aa10.43□□□□□ -0.74
Trim39-205ENSMUST00000173369 Kcnq2Q9Z351 759 aa10.43□□□□□ -0.74
Trim39-205ENSMUST00000173369 SrcapA0A087WQ44 3271 aa10.43□□□□□ -0.74
Trim39-205ENSMUST00000173369 Magea6O89010 325 aa10.43□□□□□ -0.74
Trim39-205ENSMUST00000173369 Magea3Q6T340 320 aa10.43□□□□□ -0.74
Trim39-205ENSMUST00000173369 Clca2Q8BG22 942 aa10.43□□□□□ -0.74
Trim39-205ENSMUST00000173369 Taf1dQ9D4V4 322 aa10.43□□□□□ -0.74
Trim39-205ENSMUST00000173369 Cct4P80315 539 aaKnown RBP10.42□□□□□ -0.74
Trim39-205ENSMUST00000173369 Sytl4Q9R0Q1 673 aa10.42□□□□□ -0.74
Trim39-205ENSMUST00000173369 AppP12023 770 aa10.42□□□□□ -0.74
Trim39-205ENSMUST00000173369 ArsiQ32KI9 573 aa10.42□□□□□ -0.74
Trim39-205ENSMUST00000173369 Gja10Q9WUS4 505 aa10.42□□□□□ -0.74
Trim39-205ENSMUST00000173369 Ric1Q69ZJ7 1422 aa10.42□□□□□ -0.74
Trim39-205ENSMUST00000173369 Cwc27Q3TKY6 469 aa10.41□□□□□ -0.74
Trim39-205ENSMUST00000173369 TrhQ62361 256 aa10.41□□□□□ -0.74
Trim39-205ENSMUST00000173369 Morc2aQ69ZX6 1030 aa10.41□□□□□ -0.74
Trim39-205ENSMUST00000173369 Dhx38Q80X98 1228 aa10.41□□□□□ -0.74
Trim39-205ENSMUST00000173369 MvpQ9EQK5 861 aa10.41□□□□□ -0.74
Trim39-205ENSMUST00000173369 Cyp2c69E9PXC3 491 aa10.41□□□□□ -0.74
Trim39-205ENSMUST00000173369 Nolc1E9Q5C9 702 aaKnown RBP10.41□□□□□ -0.74
Trim39-205ENSMUST00000173369 Cyp2c40P56657 491 aa10.41□□□□□ -0.74
Trim39-205ENSMUST00000173369 IarsQ8BU30 1262 aa10.41□□□□□ -0.74
Trim39-205ENSMUST00000173369 Znrd1-asQ8R0E5 213 aa10.41□□□□□ -0.74
Trim39-205ENSMUST00000173369 Ankrd44B2RXR6 993 aa10.4□□□□□ -0.74
Trim39-205ENSMUST00000173369 Edc3Q8K2D3 508 aaKnown RBP10.4□□□□□ -0.74
Trim39-205ENSMUST00000173369 Kif2cQ922S8 721 aa10.4□□□□□ -0.74
Trim39-205ENSMUST00000173369 Foxo4Q9WVH3 505 aa10.4□□□□□ -0.74
Trim39-205ENSMUST00000173369 Ets1P27577 440 aa10.4□□□□□ -0.74
Trim39-205ENSMUST00000173369 Nol10Q5RJG1 687 aaKnown RBP10.4□□□□□ -0.74
Trim39-205ENSMUST00000173369 St5Q924W7 1134 aa10.4□□□□□ -0.74
Trim39-205ENSMUST00000173369 Spata31d1bE9QA57 1361 aa10.4□□□□□ -0.74
Trim39-205ENSMUST00000173369 ScaperF8VQ70 1398 aaKnown RBP10.4□□□□□ -0.74
Trim39-205ENSMUST00000173369 Mybbp1aQ7TPV4 1344 aaKnown RBP10.4□□□□□ -0.74
Trim39-205ENSMUST00000173369 Gm7347D3YYI9 267 aa10.4□□□□□ -0.75
Trim39-205ENSMUST00000173369 Speer4aF8VPX6 267 aa10.4□□□□□ -0.75
Trim39-205ENSMUST00000173369 Cypt1Q8CH20 168 aa10.4□□□□□ -0.75
Trim39-205ENSMUST00000173369 Togaram1Q6A070 1776 aaKnown RBP10.39□□□□□ -0.75
Trim39-205ENSMUST00000173369 HellsQ60848 821 aa10.39□□□□□ -0.75
Trim39-205ENSMUST00000173369 Atxn2lQ7TQH0 1049 aaKnown RBP10.39□□□□□ -0.75
Trim39-205ENSMUST00000173369 Fam84aQ9D650 292 aa10.39□□□□□ -0.75
Trim39-205ENSMUST00000173369 Klf15Q9EPW2 415 aa10.39□□□□□ -0.75
Trim39-205ENSMUST00000173369 Brpf1B2RRD7 1212 aa10.39□□□□□ -0.75
Trim39-205ENSMUST00000173369 Npy5rO70342 466 aa10.39□□□□□ -0.75
Trim39-205ENSMUST00000173369 Chrna5Q2MKA5 467 aa10.39□□□□□ -0.75
Trim39-205ENSMUST00000173369 Srgap3Q812A2 1099 aa10.39□□□□□ -0.75
Trim39-205ENSMUST00000173369 Cd248Q91V98 765 aa10.39□□□□□ -0.75
Trim39-205ENSMUST00000173369 Ank1Q02357 1862 aa10.38□□□□□ -0.75
Trim39-205ENSMUST00000173369 Duxf3A0A0N4SV92 674 aa10.38□□□□□ -0.75
Trim39-205ENSMUST00000173369 Hmgb2P30681 210 aaKnown RBP10.38□□□□□ -0.75
Trim39-205ENSMUST00000173369 NfixP70257 488 aa10.38□□□□□ -0.75
Trim39-205ENSMUST00000173369 Rab3gap1Q80UJ7 981 aa10.38□□□□□ -0.75
Trim39-205ENSMUST00000173369 Ncoa5Q91W39 579 aaKnown RBP10.38□□□□□ -0.75
Trim39-205ENSMUST00000173369 Ep400Q8CHI8 3072 aaKnown RBP10.38□□□□□ -0.75
Trim39-205ENSMUST00000173369 Gnai2P08752 355 aaKnown RBP10.38□□□□□ -0.75
Trim39-205ENSMUST00000173369 C1qtnf12Q8R2Z0 308 aa10.38□□□□□ -0.75
Trim39-205ENSMUST00000173369 Lgr5Q9Z1P4 907 aa10.38□□□□□ -0.75
Trim39-205ENSMUST00000173369 Fkbp1aP26883 108 aaKnown RBP10.37□□□□□ -0.75
Trim39-205ENSMUST00000173369 Fhdc1Q3ULZ2 1149 aa10.37□□□□□ -0.75
Trim39-205ENSMUST00000173369 Gnat3Q3V3I2 354 aa10.37□□□□□ -0.75
Trim39-205ENSMUST00000173369 Q8C5K5 320 aa10.37□□□□□ -0.75
Trim39-205ENSMUST00000173369 Gtf2a1Q99PM3 378 aa10.37□□□□□ -0.75
Trim39-205ENSMUST00000173369 Ddx60E9PZQ1 1711 aa10.37□□□□□ -0.75
Trim39-205ENSMUST00000173369 BcorQ8CGN4 1759 aa10.37□□□□□ -0.75
Trim39-205ENSMUST00000173369 Trim34bJ3QNR8 485 aa10.37□□□□□ -0.75
Trim39-205ENSMUST00000173369 Celf1P28659 486 aaKnown RBP10.37□□□□□ -0.75
Trim39-205ENSMUST00000173369 Ppp1r42Q8R1Z4 357 aa10.37□□□□□ -0.75
Trim39-205ENSMUST00000173369 Itga6Q61739 1091 aa10.37□□□□□ -0.75
Trim39-205ENSMUST00000173369 Slc4a3P16283 1227 aa10.36□□□□□ -0.75
Trim39-205ENSMUST00000173369 IntuQ059U7 942 aa10.36□□□□□ -0.75
Trim39-205ENSMUST00000173369 Rtkn2Q14B46 604 aa10.36□□□□□ -0.75
Trim39-205ENSMUST00000173369 NexnQ7TPW1 607 aa10.36□□□□□ -0.75
Trim39-205ENSMUST00000173369 Gpr101Q80T62 511 aa10.36□□□□□ -0.75
Trim39-205ENSMUST00000173369 HlfQ8BW74 295 aa10.36□□□□□ -0.75
Trim39-205ENSMUST00000173369 Slc39a11Q8BWY7 342 aa10.36□□□□□ -0.75
Trim39-205ENSMUST00000173369 Rrs1Q9CYH6 365 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms