RNA–Protein interactions for RNA: ENSMUST00000172332.3

Ccdc71l-201, Transcript of Coiled-coil domain-containing 71-like, mousemouse

APPRIS P1 BASIC

Gene Ccdc71l, Length 4,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71l-201ENSMUST00000172332 Taf7Q9R1C0 341 aa18.43■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 IncenpQ9WU62 880 aa18.43■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Timm10P62073 90 aa18.42■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Pcdh10E9PXQ7 1057 aa18.42■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Stx8O88983 236 aa18.42■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Pank2Q3U4S0 443 aa18.42■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 ZgpatQ8VDM1 511 aa18.42■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Metap2O08663 478 aaKnown RBP18.42■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Jmjd4Q8BFT6 427 aa18.42■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Ccdc150Q8CDI7 1110 aa18.42■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Pafah1b1P63005 410 aaKnown RBP18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Bach1P97302 739 aa18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Gm21985Q6P6P5 1106 aa18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Phldb2Q8K1N2 1249 aa18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Efcab2Q9CQ46 164 aa18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Nphp4P59240 1425 aa18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Ccdc112A0AUP1 442 aa18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Sdc2P43407 202 aa18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Tyro3P55144 880 aa18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Hoxc9P09633 260 aa18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 EspnlQ3UYR4 1005 aa18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Vps18Q8R307 973 aa18.41■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Usp19Q3UJD6 1360 aa18.4■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Rnf187Q8BFX1 236 aa18.4■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Nlgn1Q99K10 843 aa18.4■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Mtmr3Q8K296 1196 aa18.4■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 NsmfQ99NF2 532 aa18.4■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 MicalclQ9D5U9 680 aa18.4■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Nckap5lQ6GQX2 1323 aa18.4■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Jakmip2D3YXK0 820 aa18.4■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Ccnl1Q52KE7 532 aaKnown RBP18.4■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Ano6Q6P9J9 911 aa18.4■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Baiap2l1Q9DBJ3 514 aa18.4■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Nucb2P81117 420 aa18.39■□□□□ 0.54
Ccdc71l-201ENSMUST00000172332 Scaf11E9PZM7 1456 aaKnown RBP18.39■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Mybbp1aQ7TPV4 1344 aaKnown RBP18.39■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Lrrfip2Q91WK0 415 aa18.39■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Pik3ap1Q9EQ32 811 aa18.39■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Cnot6lQ8VEG6 555 aa18.39■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Nphp3Q7TNH6 1325 aa18.38■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Kif3cO35066 796 aa18.38■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Idi1P58044 227 aa18.38■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Kdm4cQ8VCD7 1054 aa18.38■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Syt10Q9R0N4 523 aa18.38■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ifit1bl2Q3U687 466 aa18.38■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ppp1r21Q3TDD9 780 aa18.38■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Atp2b3Q0VF55 1220 aa18.38■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Klc3Q91W40 508 aa18.37■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Dennd4bQ3U1Y4 1499 aa18.37■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 NmiO35309 314 aa18.37■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Pdcl2Q78Y63 240 aa18.37■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Snw1Q9CSN1 536 aaKnown RBP18.37■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Slc7a3P70423 618 aa18.37■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ppp4r3bQ922R5 820 aa18.37■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Zeb2Q9R0G7 1215 aa18.37■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Rbm17Q8JZX4 405 aaKnown RBP18.36■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Pip4k2aO70172 405 aa18.36■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Cep135Q6P5D4 1140 aa18.36■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Abca5Q8K448 1642 aa18.36■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ppp1r10Q80W00 888 aaKnown RBP18.36■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Maats1Q8BRC6 783 aa18.36■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Rufy3Q9D394 469 aa18.36■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Utp18Q5SSI6 552 aaKnown RBP18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Adck5Q80V03 582 aa18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 SympkQ80X82 1284 aa18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Gng11P61953 73 aa18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ccdc82Q6PG04 518 aa18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Rab3gap1Q80UJ7 981 aa18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 ThemisQ8BGW0 636 aa18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ano10Q8BH79 659 aa18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Cdca7Q9D0M2 382 aa18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Cnpy2Q9QXT0 182 aa18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Dapk3O54784 448 aa18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Zbtb43Q9DAI4 467 aa18.35■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ccar2Q8VDP4 922 aaKnown RBP18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Klhl10Q9D5V2 608 aa18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Cwc15Q9JHS9 229 aaKnown RBP18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ets1P27577 440 aa18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ubash3aQ3V3E1 624 aa18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Skint5A7XUY5 1461 aa18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Gli2Q0VGT2 1544 aa18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ssr1Q9CY50 286 aaKnown RBP18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Tm6sf1P58749 370 aa18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Exoc5Q3TPX4 708 aa18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ankrd40Q5SUE8 363 aa18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Tmem266Q8BZB3 538 aa18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ddx27Q921N6 760 aaKnown RBP18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 P2rx7Q9Z1M0 595 aa18.34■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Gzf1Q4VBD9 706 aa18.33■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Ccdc181Q80ZU5 509 aa18.33■□□□□ 0.53
Ccdc71l-201ENSMUST00000172332 Paxbp1P58501 919 aa18.33■□□□□ 0.52
Ccdc71l-201ENSMUST00000172332 Pde1cQ64338 706 aa18.33■□□□□ 0.52
Ccdc71l-201ENSMUST00000172332 Nek11Q8C0Q4 628 aa18.33■□□□□ 0.52
Ccdc71l-201ENSMUST00000172332 Cfap157Q0VFX2 523 aa18.33■□□□□ 0.52
Ccdc71l-201ENSMUST00000172332 Pram1Q6BCL1 675 aa18.33■□□□□ 0.52
Ccdc71l-201ENSMUST00000172332 Plekho1Q9JIY0 408 aa18.33■□□□□ 0.52
Ccdc71l-201ENSMUST00000172332 Speer4dL7N216 212 aa18.32■□□□□ 0.52
Ccdc71l-201ENSMUST00000172332 Myl3P09542 204 aa18.32■□□□□ 0.52
Ccdc71l-201ENSMUST00000172332 ParvgQ9ERD8 331 aa18.32■□□□□ 0.52
Ccdc71l-201ENSMUST00000172332 Astn2Q80Z10 1352 aa18.32■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms