RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Nkx1-2P42580 305 aa8.01□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Foxk2Q3UCQ1 651 aa8.01□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Rgl3Q3UYI5 709 aa8.01□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Gm11487Q5RIS0 354 aa8.01□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Polr3glQ8R0C0 218 aa8.01□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Chd2E9PZM4 1827 aaKnown RBP8□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Tubgcp6G5E8P0 1769 aa8□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Gna15P30678 374 aa8□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Slc16a10Q3U9N9 512 aa8□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Txndc2Q6P902 515 aa8□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Znf423Q80TS5 1292 aa8□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Usp26Q99MX1 835 aa8□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Ssh2Q5SW75 1423 aa8□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Kdm5aQ3UXZ9 1690 aa8□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Mroh3A0A1D5RM54 893 aa7.99□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Stox1B2RQL2 990 aa7.99□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Mbl1P39039 239 aa7.99□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Ice2Q3UZ18 988 aaKnown RBP7.99□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Dusp4Q8BFV3 398 aa7.99□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 GrhprQ91Z53 328 aa7.99□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Prex1Q69ZK0 1650 aa7.99□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Pacs2Q3V3Q7 862 aa7.99□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Clec11aO88200 328 aa7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Dnajc2P54103 621 aaKnown RBP7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Zhx1P70121 873 aa7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Ica1lQ3TY65 431 aa7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Cep120Q7TSG1 988 aa7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Gimap5Q8BWF2 308 aa7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Tmx4Q8C0L0 335 aa7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Fcf1Q9CTH6 198 aa7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Mtmr2Q9Z2D1 643 aa7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Kif24Q6NWW5 1356 aa7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Rnpc3Q3UZ01 514 aaKnown RBP7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Htatsf1Q8BGC0 757 aa7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Pcdhb22Q91XZ8 794 aa7.98□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Slit2Q9R1B9 1521 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Map7O88735 730 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Ddx46Q569Z5 1032 aaKnown RBP7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Fam196bQ6GQV1 535 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Prdm4Q80V63 803 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Emilin2Q8K482 1074 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Gatad2bQ8VHR5 594 aaKnown RBP7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Lmtk3Q5XJV6 1424 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 UprtB1AVZ0 310 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Pnmal2G3X9N3 661 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Kcnh2O35219 1162 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Nek10Q3UGM2 1111 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 IqubQ8CDK3 788 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Calhm4Q8CE93 315 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Plcg2Q8CIH5 1265 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Cela3bQ9CQ52 269 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 UvssaQ9D479 717 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Plagl1Q9JLQ4 704 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Mapk8ip1Q9WVI9 707 aa7.97□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Akap12Q9WTQ5 1684 aa7.96□□□□□ -1.13
Ccdc38-203ENSMUST00000132214 Xirp1O70373 1129 aa7.96□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Sf3b2Q3UJB0 878 aaKnown RBP7.96□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Pde3bQ61409 1100 aa7.96□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 RragcQ99K70 398 aa7.96□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Jph1Q9ET80 660 aa7.96□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Setdb1O88974 1307 aa7.96□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 ShprhQ7TPQ3 1674 aa7.96□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 NinlQ6ZQ12 1394 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Fam155bA2BDP1 471 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Brinp3Q499E0 766 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Rc3h1Q4VGL6 1130 aaKnown RBP7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Cavin2Q63918 418 aaKnown RBP7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Bsdc1Q80Y55 427 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Dennd6aQ8BH65 605 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Fam221bQ8C627 487 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Chmp4cQ9D7F7 232 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Clstn2Q9ER65 966 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Adam7O35227 789 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Irf1P15314 329 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Sema3eP70275 775 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 R3hcc1Q8BSI6 488 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Plin1Q8CGN5 517 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Mapk8Q91Y86 384 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Bap1Q99PU7 728 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Chaf1aQ9QWF0 911 aa7.95□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Fam43bA2AM80 330 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Larp1Q6ZQ58 1072 aaKnown RBP7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Ints6lQ8BND4 861 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Bag6Q9Z1R2 1154 aaKnown RBP7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 PtprgQ05909 1442 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Mbd5B1AYB6 1498 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Dot1lQ6XZL8 1540 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Cd109Q8R422 1442 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Gm11758A2BEI6 360 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Gm11757A2BEI8 360 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Zfp735B1ARH2 734 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Trim30cD3YVI9 513 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 FechP22315 420 aaKnown RBP7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Rab6bP61294 208 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Dhx37Q6NZL1 1150 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Gabbr2Q80T41 940 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Amigo3Q8C2S7 508 aa7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Utp3Q9JI13 469 aaKnown RBP7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Sart3Q9JLI8 962 aaKnown RBP7.94□□□□□ -1.14
Ccdc38-203ENSMUST00000132214 Map3k14Q9WUL6 942 aa7.94□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms