RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Atp10bB1AWN4 1474 aa12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Disp3A3KFU9 1347 aa12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Cdhr2E9Q7P9 1308 aa12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Arfgef2A2A5R2 1792 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Cfap73J3QPZ5 306 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Ints3Q7TPD0 1041 aaKnown RBP12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Cyp2d12Q8BVD2 504 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Stx6Q9JKK1 255 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Kif3aP28741 701 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 CebpzP53569 1052 aaKnown RBP12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Anapc15P60007 132 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Nkx2-3P97334 362 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Ccdc178Q8CDV0 866 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 TkfcQ8VC30 578 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Brpf1B2RRD7 1212 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Qtrt2B8ZXI1 415 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Fam184aE9PW83 1143 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 AppP12023 770 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Trim30aP15533 496 aa12.82□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Kiaa0754Q69ZZ9 979 aa12.81□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Kank4Q6P9J5 1016 aa12.81□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 C1qtnf12Q8R2Z0 308 aa12.81□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Myo5bP21271 1818 aa12.81□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 DpydQ8CHR6 1025 aa12.81□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Noc3lQ8VI84 807 aaKnown RBP12.81□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Strn4P58404 760 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 SrrtQ99MR6 875 aaKnown RBP12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Amotl1Q9D4H4 968 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Mrvi1Q9WUX5 899 aaKnown RBP12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Tom1O88746 492 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Ube2hP62257 183 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Atp2b3Q0VF55 1220 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Nxf2Q4ZGD8 691 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Zbtb45Q52KG4 520 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Kiaa0753Q6A000 959 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Tbc1d31Q6NXY1 996 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Unc5clQ6R653 518 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Zscan22Q8BGS5 496 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Bcl2l12Q9D3J3 255 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Bcl9lQ67FY2 1494 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Zfp142G5E869 1843 aa12.8□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Tpd52l1O54818 204 aa12.79□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Inpp5bQ8K337 993 aa12.79□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Rufy3Q9D394 469 aa12.79□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Nol7Q9D7Z3 254 aaKnown RBP12.79□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Zfp804bA0A0G2JGH6 1343 aa12.79□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Ddx19aQ61655 478 aaKnown RBP12.79□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Zfp251Q6PCX8 632 aa12.79□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Ybx3Q9JKB3 361 aaKnown RBP12.79□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Hoxa7P02830 229 aa12.79□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Wdr93Q402B2 695 aa12.79□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Pnpla7A2AJ88 1352 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Map7d2A2AG50 781 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Ier5O89113 308 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Cyp2d11P24457 504 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 EzrP26040 586 aaKnown RBP12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 HdgfP51859 237 aaKnown RBP12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Map3k13Q1HKZ5 959 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Tceanc2Q8R2M0 207 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Cd22P35329 862 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Syt1P46096 421 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Cnnm3Q32NY4 713 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Ccdc66Q6NS45 935 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 ThemisQ8BGW0 636 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Pwp2Q8BU03 919 aaKnown RBP12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Wdr24Q8CFJ9 790 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Simc1E9Q6E9 1354 aa12.78□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Brpf3B2KF05 1204 aaKnown RBP12.77□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 U2af2P26369 475 aaKnown RBP12.77□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Med4Q9CQA5 270 aa12.77□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Cnksr1A2A9K7 700 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Ms4a2P20490 235 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Slc7a3P70423 618 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 EspnlQ3UYR4 1005 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Sass6Q80UK7 654 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Ccdc155Q80VJ8 648 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Frmd3Q8BHD4 595 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Ccdc7Q9D541 371 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Riok3Q9DBU3 519 aaKnown RBP12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Zbtb12Q9Z150 459 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Kcnf1Q7TSH7 493 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Tsr2Q8C8T8 191 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Brf1Q8CFK2 676 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 ZgpatQ8VDM1 511 aa12.77□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Zap70P43404 618 aa12.76□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 CoilQ5SU73 570 aa12.76□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Zpr1Q62384 459 aa12.76□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Nup153E9Q3G8 1462 aaKnown RBP12.76□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Aox2Q5SGK3 1345 aa12.76□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Ubap1lG3UW59 384 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Prdm4Q80V63 803 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Nup88Q8CEC0 753 aaKnown RBP12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Cdca7lQ922M5 438 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Tceal9Q9DD24 104 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Exoc6bA6H5Z3 810 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Cfdp1O88271 295 aaKnown RBP12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Usp25P57080 1055 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Cchcr1Q8K2I2 770 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Slit1Q80TR4 1531 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Gm973E9Q295 1059 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms