RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Psma5Q9Z2U1 241 aaKnown RBP28.82■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Ric1Q69ZJ7 1422 aa28.82■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Tiam2Q6ZPF3 1715 aa28.82■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Rnf20Q5DTM8 973 aa28.81■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Syce3B5KM66 88 aa28.81■■■□□ 2.2
Ubp1-203ENSMUST00000116492 DbnlQ62418 436 aa28.81■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Slx1bQ8BX32 270 aa28.81■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Atf7Q8R0S1 413 aa28.81■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Cdca7lQ922M5 438 aa28.81■■■□□ 2.2
Ubp1-203ENSMUST00000116492 PhaxQ9JJT9 385 aaKnown RBP28.81■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Txnrd1Q9JMH6 613 aa28.81■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Zfp804bA0A0G2JGH6 1343 aa28.8■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Mdm2P23804 489 aa28.8■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Ppp4r3aQ6P2K6 820 aa28.8■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Pdcl3Q8BVF2 240 aa28.8■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Col22a1E9Q7P1 1613 aa28.8■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Gm21680A0A0G2JGR8 267 aa28.79■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Wdr93Q402B2 695 aa28.79■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Neurod6P48986 337 aa28.79■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Nlrp1aQ2LKU9 1182 aa28.79■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Ints5Q8CHT3 1018 aa28.78■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Bms1Q6PGF5 1284 aaKnown RBP28.78■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Jarid2Q62315 1234 aa28.77■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Dis3l2Q8CI75 870 aaKnown RBP28.77■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Rbbp8nlA2ABX0 614 aa28.76■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Mst1rQ62190 1378 aa28.76■■■□□ 2.2
Ubp1-203ENSMUST00000116492 Hmg20bQ9Z104 317 aa28.76■■■□□ 2.2
Ubp1-203ENSMUST00000116492 RubcnlQ3TD16 648 aa28.76■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Prl3d3A0A0M6L0J6 224 aa28.75■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Ugt1a5B2RT14 529 aa28.75■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Polr3dQ91WD1 398 aa28.75■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Stard3nlQ9DCI3 235 aa28.75■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Ltbp4Q8K4G1 1666 aa28.75■■■□□ 2.19
Ubp1-203ENSMUST00000116492 AppP12023 770 aa28.74■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Pkp1P97350 728 aaKnown RBP28.74■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Pip4k2bQ80XI4 416 aa28.74■■■□□ 2.19
Ubp1-203ENSMUST00000116492 StrbpQ91WM1 672 aaKnown RBP28.74■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Brinp3Q499E0 766 aa28.73■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Dhx38Q80X98 1228 aa28.73■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Cwc25Q9DBF7 416 aa28.73■■■□□ 2.19
Ubp1-203ENSMUST00000116492 AtrnQ9WU60 1428 aa28.73■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Nol12Q8BG17 217 aa28.73■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Sp8Q8BMJ8 486 aa28.73■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Kdm4aQ8BW72 1064 aa28.73■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Ehd4Q9EQP2 541 aa28.73■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Ank1Q02357 1862 aa28.72■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Sult6b1P0CC03 303 aa28.72■■■□□ 2.19
Ubp1-203ENSMUST00000116492 F2rP30558 430 aa28.72■■■□□ 2.19
Ubp1-203ENSMUST00000116492 AK157302I3ITR1 129 aa28.72■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Nek11Q8C0Q4 628 aa28.72■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Isca1Q9D924 129 aa28.72■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Mrc1Q61830 1456 aa28.71■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Cdhr2E9Q7P9 1308 aa28.71■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Cers3Q1A3B0 383 aa28.71■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Rbm27Q5SFM8 1060 aaKnown RBP28.71■■■□□ 2.19
Ubp1-203ENSMUST00000116492 NfkbibQ60778 359 aa28.71■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Rps6kb1Q8BSK8 525 aa28.71■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Smc4Q8CG47 1286 aa28.7■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Mrpl50Q8VDT9 159 aaKnown RBP28.7■■■□□ 2.19
Ubp1-203ENSMUST00000116492 Eef2kO08796 724 aa28.7■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Bmp2kQ91Z96 1138 aa28.7■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Tubb6Q922F4 447 aa28.7■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Paxip1Q6NZQ4 1056 aa28.69■■■□□ 2.18
Ubp1-203ENSMUST00000116492 AbraQ8BUZ1 375 aa28.69■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Tmc2Q8R4P4 888 aa28.69■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Ube2hP62257 183 aa28.69■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Col4a1P02463 1669 aa28.68■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Prl3d2F6R3P9 224 aa28.68■■■□□ 2.18
Ubp1-203ENSMUST00000116492 NaspQ99MD9 773 aaKnown RBP28.68■■■□□ 2.18
Ubp1-203ENSMUST00000116492 LratQ9JI60 231 aa28.68■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Aox1O54754 1333 aa28.68■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Fbxl16A2RT62 479 aa28.67■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Ddrgk1Q80WW9 315 aa28.67■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Atg9aQ68FE2 551 aa28.67■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Mylk2Q8VCR8 613 aa28.67■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Myd88P22366 296 aa28.66■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Vps54Q5SPW0 977 aa28.66■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Gtf2a1Q99PM3 378 aa28.66■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Med4Q9CQA5 270 aa28.66■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Usp48Q3V0C5 1052 aa28.66■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Fam102bQ8BQS4 339 aa28.66■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Ccdc178Q8CDV0 866 aa28.66■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Ltb4r2Q9JJL9 360 aa28.66■■■□□ 2.18
Ubp1-203ENSMUST00000116492 DpydQ8CHR6 1025 aa28.65■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Fez1Q8K0X8 392 aa28.65■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Erc1Q99MI1 1120 aa28.64■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Casc1Q6TDU8 730 aa28.64■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Fam213aQ9CYH2 218 aa28.64■■■□□ 2.18
Ubp1-203ENSMUST00000116492 Abca3Q8R420 1704 aa28.64■■■□□ 2.17
Ubp1-203ENSMUST00000116492 FanccP50652 591 aa28.63■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Tbc1d30Q69ZT9 766 aa28.63■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Bloc1s2Q9CWG9 143 aa28.63■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Rrs1Q9CYH6 365 aaKnown RBP28.63■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Pard3Q99NH2 1333 aa28.63■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Ddx46Q569Z5 1032 aaKnown RBP28.62■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Gm12185Q5NCB2 835 aa28.62■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Ppp6r1Q7TSI3 856 aa28.62■■■□□ 2.17
Ubp1-203ENSMUST00000116492 SrrtQ99MR6 875 aaKnown RBP28.62■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Rcan3Q9JKK0 239 aa28.62■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Gsdma2Q32M21 443 aa28.61■■■□□ 2.17
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms