RNA–Protein interactions for RNA: ENSMUST00000108419.8

Vps53-203, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-203ENSMUST00000108419 Smarcc1P97496 1104 aa20.95■□□□□ 0.94
Vps53-203ENSMUST00000108419 Edc3Q8K2D3 508 aaKnown RBP20.95■□□□□ 0.94
Vps53-203ENSMUST00000108419 Trim44Q9QXA7 346 aa20.95■□□□□ 0.94
Vps53-203ENSMUST00000108419 Arhgap33Q80YF9 1305 aa20.95■□□□□ 0.94
Vps53-203ENSMUST00000108419 Gm13023A2A8N2 498 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 SlkO54988 1233 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Ddrgk1Q80WW9 315 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Ttc19Q8CC21 365 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Abcc4E9Q236 1325 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Nek4Q9Z1J2 792 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Trip6Q9Z1Y4 480 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Mrc1Q61830 1456 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Cyp19a1P28649 503 aa20.93■□□□□ 0.94
Vps53-203ENSMUST00000108419 Esco1Q69Z69 843 aa20.93■□□□□ 0.94
Vps53-203ENSMUST00000108419 Ric1Q69ZJ7 1422 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 Sugp2Q8CH09 1067 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 GptQ8QZR5 496 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 Tbc1d9Q3UYK3 1264 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 Ptpdc1Q6NZK8 747 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 Slf2Q6P9P0 1278 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 GalcP54818 684 aa20.91■□□□□ 0.94
Vps53-203ENSMUST00000108419 Cct4P80315 539 aaKnown RBP20.91■□□□□ 0.94
Vps53-203ENSMUST00000108419 Clca2Q8BG22 942 aa20.91■□□□□ 0.94
Vps53-203ENSMUST00000108419 Dhx38Q80X98 1228 aa20.9■□□□□ 0.94
Vps53-203ENSMUST00000108419 CenppQ9CZ92 286 aa20.9■□□□□ 0.94
Vps53-203ENSMUST00000108419 Tpx2A2APB8 745 aaKnown RBP20.89■□□□□ 0.94
Vps53-203ENSMUST00000108419 CalcaP70160 136 aa20.89■□□□□ 0.94
Vps53-203ENSMUST00000108419 Tfip11Q9ERA6 838 aaKnown RBP20.89■□□□□ 0.94
Vps53-203ENSMUST00000108419 Arap2Q8BZ05 1703 aa20.89■□□□□ 0.93
Vps53-203ENSMUST00000108419 Fkbp1aP26883 108 aaKnown RBP20.89■□□□□ 0.93
Vps53-203ENSMUST00000108419 Tpm2P58774 284 aa20.89■□□□□ 0.93
Vps53-203ENSMUST00000108419 BcanQ61361 883 aa20.89■□□□□ 0.93
Vps53-203ENSMUST00000108419 LratQ9JI60 231 aa20.89■□□□□ 0.93
Vps53-203ENSMUST00000108419 AppP12023 770 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 Tmem87bQ8BKU8 555 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 Q8C5K5 320 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 Hmox1P14901 289 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 NexnQ7TPW1 607 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 Smc4Q8CG47 1286 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 Fbxo41Q6NS60 873 aa20.87■□□□□ 0.93
Vps53-203ENSMUST00000108419 Tex2Q6ZPJ0 1128 aaKnown RBP20.87■□□□□ 0.93
Vps53-203ENSMUST00000108419 Ppp6r1Q7TSI3 856 aa20.87■□□□□ 0.93
Vps53-203ENSMUST00000108419 Zkscan2G3X952 960 aa20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 DekQ7TNV0 380 aaKnown RBP20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 Tmx3Q8BXZ1 456 aa20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 4930504O13RikQ8C5Z9 145 aa20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 Ly75Q60767 1723 aa20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 Dhx16G3X8X0 1044 aaKnown RBP20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 Kiaa0319Q5SZV5 1081 aa20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 Dctn1O08788 1281 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Cops6O88545 324 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Prl3d3A0A0M6L0J6 224 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Prr29B1ARI9 187 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 C4bP01029 1738 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Susd4Q8BH32 490 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Prune1Q8BIW1 454 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Prl3d2F6R3P9 224 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Pdia3P27773 505 aaKnown RBP20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Snai1Q02085 264 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Ifit1bl2Q3U687 466 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Zbtb45Q52KG4 520 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Dis3l2Q8CI75 870 aaKnown RBP20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 RestQ8VIG1 1082 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Q9D2X8 372 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 CoblQ5NBX1 1337 aaKnown RBP20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Cyp2c23E9Q5K4 494 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 1700010I14RikQ7TPG0 532 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Ankrd31A0A140LI88 1765 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Sult6b1P0CC03 303 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Lrrc43Q3V0L5 667 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Bag4Q8CI61 457 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Trim34aQ99PP6 485 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Dmrtc1Q9D9R7 182 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Foxo4Q9WVH3 505 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Myh1Q5SX40 1942 aa20.83■□□□□ 0.92
Vps53-203ENSMUST00000108419 Fam228bQ497Q6 232 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 SowahdQ8BY98 327 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Chmp3Q9CQ10 224 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Lama4P97927 1816 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Casq1O09165 405 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Neurod6P48986 337 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Atp1b3P97370 278 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Atg9aQ68FE2 551 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Bloc1s4Q8VED2 215 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Ppp6r3Q922D4 844 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 NgdnQ9DB96 315 aaKnown RBP20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Plcb3P51432 1234 aaKnown RBP20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 Cyp7a1Q64505 503 aa20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 Taok2Q6ZQ29 1240 aa20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 Slc26a8Q8R0C3 999 aa20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 EngaseQ8BX80 734 aa20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 Greb1lB9EJV3 1913 aa20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 Anapc15-psA0A140T8L6 141 aa20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Ankrd13dQ6PD24 605 aa20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 GorabQ8BRM2 368 aa20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Taf5lQ91WQ5 589 aa20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Zbtb38Q3LR78 1197 aa20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Nol10Q5RJG1 687 aaKnown RBP20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Sf3a1Q8K4Z5 791 aaKnown RBP20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Dpf1Q9QX66 387 aa20.8■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms