RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 Kcnn1Q9EQR3 537 aa18.38■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Ccdc181Q80ZU5 509 aa18.38■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 LarsQ8BMJ2 1178 aa18.38■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Ccdc150Q8CDI7 1110 aa18.38■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Zscan20B2KFW1 1030 aa18.37■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Tmem132eQ6IEE6 982 aa18.37■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Gtpbp4Q99ME9 634 aaKnown RBP18.37■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Pafah1b1P63005 410 aaKnown RBP18.37■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Ccdc93Q7TQK5 629 aa18.37■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 U2af1l4Q8BGJ9 220 aa18.37■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Map3k19E9Q3S4 1311 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Gm21698A0A087WQP8 267 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Gm21663A0A0G2JE01 267 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Gm7361D3Z6R1 267 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 5031410I06RikE9Q4E0 267 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Gm1979E9QAN3 267 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Gm5862K7N5V5 267 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Gm10220K7N660 267 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 NmiO35309 314 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Tbc1d7Q9D0K0 293 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Gm21985Q6P6P5 1106 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 MlecQ6ZQI3 291 aaKnown RBP18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Tmem87bQ8BKU8 555 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Tmem132aQ922P8 1018 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Smg7Q5RJH6 1138 aaKnown RBP18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Flad1Q8R123 492 aa18.36■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Kif2cQ922S8 721 aa18.35■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Gm10563F6WIE4 79 aa18.35■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Ccdc73Q8CDM4 1066 aa18.35■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Gps2Q921N8 327 aa18.35■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Mtx1P47802 317 aa18.35■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Irf5P56477 497 aa18.35■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Wasf1Q8R5H6 559 aa18.35■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Speer4bQ9D9F7 267 aa18.35■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Baiap2l1Q9DBJ3 514 aa18.35■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Kiaa1551Q5DTW7 1521 aa18.35■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Plcd1Q8R3B1 756 aa18.34■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Lmbr1lQ9D1E5 489 aa18.34■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Lmbr1Q9JIT0 490 aa18.34■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Slc13a4Q8BZ82 625 aa18.34■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Vps53Q8CCB4 832 aa18.34■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Fam50bQ9WTJ8 334 aa18.34■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Zkscan5Q9Z1D8 819 aa18.34■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Snap23O09044 210 aa18.34■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Kdm5aQ3UXZ9 1690 aa18.34■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Larp6Q8BN59 492 aa18.34■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Stim1P70302 685 aa18.33■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Plcd3Q8K2J0 785 aa18.33■□□□□ 0.53
Sptbn4-204ENSMUST00000108364 Pip4k2aO70172 405 aa18.33■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Sdc2P43407 202 aa18.33■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Wdr24Q8CFJ9 790 aa18.33■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Fam208aQ69ZR9 1610 aaKnown RBP18.33■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Grm8P47743 908 aa18.33■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Sh3bp1P55194 680 aa18.33■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Jarid2Q62315 1234 aa18.33■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Pnpla2Q8BJ56 486 aa18.33■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Stk36Q69ZM6 1316 aa18.33■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Rbm33Q9CXK9 1231 aaKnown RBP18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Leo1Q5XJE5 667 aa18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Brd3Q8K2F0 726 aaKnown RBP18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Cyp26c1B2RXA7 518 aa18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Dapk3O54784 448 aa18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Eya1P97767 591 aa18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Bcl11bQ99PV8 884 aa18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Asxl2Q8BZ32 1370 aa18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Tulp4Q9JIL5 1547 aa18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Trap1aP19473 224 aa18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 L1td1Q587J6 782 aaKnown RBP18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Klhl30Q8C3F7 581 aa18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Rbm42Q91V81 474 aaKnown RBP18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 DonsonQ9QXP4 560 aa18.32■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 EspnlQ3UYR4 1005 aa18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Pde1cQ64338 706 aa18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Amotl2Q8K371 772 aa18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Elf2Q9JHC9 593 aa18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Trim28Q62318 834 aa18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Naip7Q9JIB3 1402 aa18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Prrc2bQ7TPM1 1486 aaKnown RBP18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Znf568E9PYI1 671 aa18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Clec11aO88200 328 aa18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Ercc3P49135 783 aa18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Sptlc2P97363 560 aaKnown RBP18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Ehmt1Q5DW34 1296 aa18.31■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Ces1hD3Z298 562 aa18.3■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Rps6kb1Q8BSK8 525 aa18.3■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Bicc1Q99MQ1 977 aaKnown RBP18.3■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Ccdc43Q9CR29 222 aaKnown RBP18.3■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Tnni2P13412 182 aa18.3■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Ccdc82Q6PG04 518 aa18.3■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Kcnh5Q920E3 988 aa18.3■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Gnat3Q3V3I2 354 aa18.3■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Ankrd40Q5SUE8 363 aa18.3■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Ccdc96Q9CR92 584 aa18.3■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Sycp1Q62209 993 aa18.29■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 4930548H24RikQ9D496 437 aa18.29■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Frmpd2A0A140LI67 1392 aa18.29■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Gm21680A0A0G2JGR8 267 aa18.29■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Ccdc121E9Q6D3 323 aa18.29■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 Dnm1P39053 867 aa18.29■□□□□ 0.52
Sptbn4-204ENSMUST00000108364 FanccP50652 591 aa18.29■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms