RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Fam213aQ9CYH2 218 aa28.02■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Myh1Q5SX40 1942 aa28.02■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Pde4bB1AWC9 736 aa28.01■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Kif13bA0A286YCV9 1847 aa28.01■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Eif3aP23116 1344 aaKnown RBP28■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Ppm1gQ61074 542 aa28■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Ttc19Q8CC21 365 aa28■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Foxo4Q9WVH3 505 aa28■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Duox1A2AQ92 1551 aa28■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Fam13aQ8BGI4 693 aa27.99■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Kif18aQ91WD7 886 aa27.99■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Casz1Q9CWL2 1761 aa27.99■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Cops6O88545 324 aa27.99■■■□□ 2.07
Scn1b-201ENSMUST00000098548 StrcQ8VIM6 1809 aa27.97■■■□□ 2.07
Scn1b-201ENSMUST00000098548 BcanQ61361 883 aa27.96■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Ak7Q9D2H2 614 aa27.96■■■□□ 2.07
Scn1b-201ENSMUST00000098548 4930567H17RikQ3V0K5 233 aa27.95■■■□□ 2.07
Scn1b-201ENSMUST00000098548 Greb1lB9EJV3 1913 aa27.94■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Tgfb1i1Q62219 461 aa27.94■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Cyp7a1Q64505 503 aa27.94■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Foxo3Q9WVH4 672 aa27.94■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Hsp90ab1P11499 724 aaKnown RBP27.93■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Gnat3Q3V3I2 354 aa27.93■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Wdhd1P59328 1117 aa27.92■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Nlrp9bQ66X22 1003 aa27.92■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Mum1Q6DID5 682 aa27.92■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Col4a5Q63ZW6 1691 aa27.91■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Prdm11A2AGX3 565 aa27.91■■■□□ 2.06
Scn1b-201ENSMUST00000098548 GpkowQ56A08 488 aa27.91■■■□□ 2.06
Scn1b-201ENSMUST00000098548 InsrrQ9WTL4 1300 aa27.91■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Atp8b2P98199 1209 aa27.9■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Gpr150Q8BL07 427 aa27.9■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Rtn4Q99P72 1162 aaKnown RBP27.9■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Mtfr1lQ9CWE0 289 aa27.9■■■□□ 2.06
Scn1b-201ENSMUST00000098548 Jarid2Q62315 1234 aa27.89■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Myt1Q8CFC2 1127 aa27.89■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Nphp1Q9QY53 687 aa27.89■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Plcb3P51432 1234 aaKnown RBP27.88■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Wdr63B2RY71 923 aa27.87■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Cct4P80315 539 aaKnown RBP27.87■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Adora1Q60612 326 aa27.86■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Tceal9Q9DD24 104 aa27.86■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Zbtb38Q3LR78 1197 aa27.86■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Srgap3Q812A2 1099 aa27.86■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Cwc27Q3TKY6 469 aa27.85■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Tbc1d32Q3URV1 1296 aa27.84■■■□□ 2.05
Scn1b-201ENSMUST00000098548 NexnQ7TPW1 607 aa27.84■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Ppp1r42Q8R1Z4 357 aa27.84■■■□□ 2.05
Scn1b-201ENSMUST00000098548 St5Q924W7 1134 aa27.84■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Gja10Q9WUS4 505 aa27.84■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Ambra1A2AH22 1300 aa27.83■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Mybbp1aQ7TPV4 1344 aaKnown RBP27.83■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Ier5O89113 308 aa27.83■■■□□ 2.05
Scn1b-201ENSMUST00000098548 En2P09066 324 aa27.83■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Eva1cP58659 440 aa27.83■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Gja5Q01231 358 aa27.83■■■□□ 2.05
Scn1b-201ENSMUST00000098548 Trim34bJ3QNR8 485 aa27.82■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Ppm1fQ8CGA0 452 aa27.82■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Mmp8O70138 465 aa27.82■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Slc4a10Q5DTL9 1118 aa27.82■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Cog6Q8R3I3 657 aa27.82■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Rbm5Q91YE7 815 aaKnown RBP27.82■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Smc4Q8CG47 1286 aa27.81■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Znrd1-asQ8R0E5 213 aa27.81■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Pa2g4P50580 394 aaKnown RBP27.8■■■□□ 2.04
Scn1b-201ENSMUST00000098548 EappQ5BU09 281 aa27.8■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Atxn2lQ7TQH0 1049 aaKnown RBP27.8■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Dnai1Q8C0M8 701 aa27.8■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Q8C6G1 249 aa27.8■■■□□ 2.04
Scn1b-201ENSMUST00000098548 FanclQ9CR14 375 aa27.79■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Cyp46a1Q9WVK8 500 aa27.79■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Nol10Q5RJG1 687 aaKnown RBP27.78■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Kcnq2Q9Z351 759 aa27.78■■■□□ 2.04
Scn1b-201ENSMUST00000098548 4931408C20RikE9PWP9 1381 aa27.78■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Mcmdc2E9Q956 681 aa27.77■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Aknad1E9Q8N6 675 aa27.77■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Itga6Q61739 1091 aa27.77■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Strip1Q8C079 837 aa27.77■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Ttc14Q9CSP9 761 aa27.77■■■□□ 2.04
Scn1b-201ENSMUST00000098548 Anapc15-psA0A140T8L6 141 aa27.76■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Ccdc146E9Q9F7 977 aa27.76■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Prl3d2F6R3P9 224 aa27.76■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Sf3b3Q921M3 1217 aaKnown RBP27.76■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Gm7347D3YYI9 267 aa27.75■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Speer4aF8VPX6 267 aa27.75■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Rabep1O35551 862 aa27.75■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Magea1O89006 320 aa27.75■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Magea5O89009 320 aa27.75■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Rad23bP54728 416 aa27.75■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Cyp2c67Q569X9 491 aa27.75■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Magea2Q9R2A2 320 aa27.75■■■□□ 2.03
Scn1b-201ENSMUST00000098548 VeztQ3ZK22 780 aa27.74■■■□□ 2.03
Scn1b-201ENSMUST00000098548 CenppQ9CZ92 286 aa27.74■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Popdc2Q9ES82 367 aa27.74■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Pnmal2G3X9N3 661 aa27.73■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Ubxn2bQ0KL01 331 aa27.73■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Kif2cQ922S8 721 aa27.73■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Sh3tc1G3X9F6 1346 aa27.73■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Atg4a-psA0A0G2JFS9 396 aa27.73■■■□□ 2.03
Scn1b-201ENSMUST00000098548 VgfQ0VGU4 617 aa27.73■■■□□ 2.03
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms