RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Letm1Q9Z2I0 738 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Map3k5O35099 1380 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 TbcaP48428 108 aaKnown RBP11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Utp18Q5SSI6 552 aaKnown RBP11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ankrd40Q5SUE8 363 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ccdc42Q5SV66 316 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Rassf10Q8BL43 508 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Fam163aQ8CAA5 168 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 SncbQ91ZZ3 133 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Eftud2O08810 971 aaKnown RBP11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Cdr2P97817 455 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Washc4Q3UMB9 1173 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ift88Q61371 824 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Atp1a2Q6PIE5 1020 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Cdk19Q8BWD8 501 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ano2Q8CFW1 1002 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Rad50P70388 1312 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Card6E9PWH2 1175 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ampd3O08739 766 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 HdgfP51859 237 aaKnown RBP11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ncbp3Q8BZR9 615 aaKnown RBP11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Q9D9H8 365 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Sept6Q9R1T4 434 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Speer4aF8VPX6 267 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Tsga10Q6NY15 697 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ctdp1Q7TSG2 960 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Arhgap31A6X8Z5 1425 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Zfpm1O35615 995 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Kif5bQ61768 963 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Txndc16Q7TN22 820 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Trim6Q8BGE7 488 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ribc1Q9D0B8 379 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Klhl10Q9D5V2 608 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Gbp2Q9Z0E6 589 aa11.73□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ppp6r3Q922D4 844 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Gas2l2Q5SSG4 860 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Slc12a5Q91V14 1138 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Smtnl1Q99LM3 459 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Rbm8a2A0A0N4SUH6 174 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Pdlim2Q8R1G6 349 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Rbm8aQ9CWZ3 174 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Cep89Q9CZX2 791 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Osbpl5Q9ER64 874 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Gucy1a3Q9ERL9 691 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Sycp2lA0A0M3U1B0 842 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Lig3P97386 1015 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Atp2b3Q0VF55 1220 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 BcanQ61361 883 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Cep131Q62036 1060 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Tti2Q8BGV4 512 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Stac3Q8BZ71 360 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Lrrc45Q8CIM1 670 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Bmp2kQ91Z96 1138 aa11.72□□□□□ -0.53
Lig4-201ENSMUST00000095476 Zscan22Q8BGS5 496 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 RestQ8VIG1 1082 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Cavin2Q63918 418 aaKnown RBP11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Mum1Q6DID5 682 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Themis2Q91YX0 663 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Znf704Q9ERQ3 566 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ppp2r3dQ9Z176 491 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ythdc2B2RR83 1445 aaKnown RBP11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Disp1Q3TDN0 1521 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Arhgap5P97393 1501 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Gm28919A0A087WP35 240 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Cpsf2O35218 782 aaKnown RBP11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Actn3O88990 900 aaKnown RBP11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Mybpc2Q5XKE0 1136 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ttc27Q8CD92 847 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ctage5Q8R311 779 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Stard3nlQ9DCI3 235 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Egfl6Q9JJZ5 550 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Tnip1Q9WUU8 647 aa11.71□□□□□ -0.53
Lig4-201ENSMUST00000095476 Cyb5rlB1AS42 316 aa11.71□□□□□ -0.54
Lig4-201ENSMUST00000095476 Diaph1O08808 1255 aa11.71□□□□□ -0.54
Lig4-201ENSMUST00000095476 Cct5P80316 541 aaKnown RBP11.71□□□□□ -0.54
Lig4-201ENSMUST00000095476 Ppp1r10Q80W00 888 aaKnown RBP11.71□□□□□ -0.54
Lig4-201ENSMUST00000095476 Spats2Q8K1N4 545 aaKnown RBP11.71□□□□□ -0.54
Lig4-201ENSMUST00000095476 Setdb1O88974 1307 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Dnajc21E9Q8D0 531 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Gsdma2Q32M21 443 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Snd1Q78PY7 910 aaKnown RBP11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Tmem67Q8BR76 992 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Tceanc2Q8R2M0 207 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Yeats4Q9CR11 227 aaKnown RBP11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Il1rapl2Q9ERS6 686 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 TefQ9JLC6 301 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Uchl5Q9WUP7 329 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Knop1Q9Z2Q2 478 aaKnown RBP11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Prim1P20664 417 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Irx1P81068 480 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Aldh1l2Q8K009 923 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Gramd4Q8CB44 633 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Rufy3Q9D394 469 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Lztfl1Q9JHQ5 299 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Ca8P28651 291 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Map3k7clP58500 142 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 MmeQ61391 750 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Gigyf2Q6Y7W8 1291 aaKnown RBP11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Sel1lQ9Z2G6 790 aa11.7□□□□□ -0.54
Lig4-201ENSMUST00000095476 Mug2P28666 1451 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms