RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Arhgef11Q68FM7 1552 aa18.19■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Gas2l3Q3UWW6 683 aa18.19■□□□□ 0.5
Clcn3-203ENSMUST00000093490 RtcbQ99LF4 505 aaKnown RBP18.19■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Bloc1s2Q9CWG9 143 aa18.19■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Bcar3Q9QZK2 820 aa18.19■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Epb41l3Q9WV92 929 aa18.19■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Gcc2Q8CHG3 1679 aa18.19■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Adamts12Q811B3 1600 aa18.18■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Grm8P47743 908 aa18.18■□□□□ 0.5
Clcn3-203ENSMUST00000093490 SnrkQ8VDU5 748 aa18.18■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Liat1Q810M6 228 aa18.18■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Ccdc158Q8CDI6 1109 aa18.18■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Atf7Q8R0S1 413 aa18.18■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Mtmr3Q8K296 1196 aa18.18■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Hoxc9P09633 260 aa18.18■□□□□ 0.5
Clcn3-203ENSMUST00000093490 EvcP57680 1005 aa18.18■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Ampd3O08739 766 aa18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Slain2Q8CI08 581 aa18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Pde3aQ9Z0X4 1141 aa18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Palm3A2TJV2 734 aa18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Tsg101Q61187 391 aa18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Dydc1Q9D9T0 175 aa18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Mug2P28666 1451 aa18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 KdrP35918 1367 aa18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Plch2A2AP18 1501 aa18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Ncbp3Q8BZR9 615 aaKnown RBP18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Ptch1Q61115 1434 aa18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Api5O35841 504 aaKnown RBP18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Rnf187Q8BFX1 236 aa18.17■□□□□ 0.5
Clcn3-203ENSMUST00000093490 CrklP47941 303 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Atp2b3Q0VF55 1220 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Cep135Q6P5D4 1140 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Smc1bQ920F6 1248 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Gm18336A0A140LIU8 765 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Gm42641I6L9G2 585 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Zap70P43404 618 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Tspyl3Q3UYP3 334 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Morc2aQ69ZX6 1030 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Cdca8Q8BHX3 289 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 AtripQ8BMG1 785 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Snw1Q9CSN1 536 aaKnown RBP18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Cnnm2Q3TWN3 875 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Sde2Q8K1J5 448 aaKnown RBP18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Knop1Q9Z2Q2 478 aaKnown RBP18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Sh3tc1G3X9F6 1346 aa18.16■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Ncf1Q09014 390 aa18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Mrps27Q8BK72 415 aaKnown RBP18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Podxl2Q8CAE9 603 aa18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Rdm1Q9CQK3 281 aa18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Fnbp4Q6ZQ03 1031 aa18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Sass6Q80UK7 654 aa18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Mrpl44Q9CY73 333 aaKnown RBP18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Mmel1Q9JLI3 765 aa18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Hs2st1Q8R3H7 356 aa18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Prm3Q62100 101 aa18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Xrcc4Q924T3 326 aa18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Fez2Q6TYB5 348 aa18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 Tubb4aQ9D6F9 444 aa18.15■□□□□ 0.5
Clcn3-203ENSMUST00000093490 LifrP42703 1092 aa18.14■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Lmbr1lQ9D1E5 489 aa18.14■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Map3k19E9Q3S4 1311 aa18.14■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Ppfia1B2RXQ2 1266 aa18.14■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Atp8b2P98199 1209 aa18.14■□□□□ 0.49
Clcn3-203ENSMUST00000093490 LyarQ08288 388 aaKnown RBP18.14■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Kdm5cP41230 1554 aa18.14■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Ncapg2Q6DFV1 1138 aa18.14■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Ccdc73Q8CDM4 1066 aa18.14■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Tbc1d2bQ3U0J8 965 aa18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Exoc8Q6PGF7 716 aa18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Lrrfip2Q91WK0 415 aa18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 IncenpQ9WU62 880 aa18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Ccdc66Q6NS45 935 aa18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Zbtb22Q9Z0G7 638 aa18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Duxf3A0A0N4SV92 674 aa18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Gm10093D3YYI8 482 aa18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Hdac1O09106 482 aaKnown RBP18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Tmem143Q8VD26 458 aa18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Il1rapl2Q9ERS6 686 aa18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Cetn1P41209 172 aa18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Nol7Q9D7Z3 254 aaKnown RBP18.13■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Gnat2P50149 354 aa18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Usp25P57080 1055 aa18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Armc3A2AU72 881 aa18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Aldh1l2Q8K009 923 aa18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Cfap53Q9D439 514 aa18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Plxnc1Q9QZC2 1574 aa18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 GnaqP21279 359 aa18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Card10P58660 1021 aa18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Cfap157Q0VFX2 523 aa18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Eya1P97767 591 aa18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Ktn1Q61595 1327 aaKnown RBP18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Srgap1Q91Z69 1062 aa18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Ssr1Q9CY50 286 aaKnown RBP18.12■□□□□ 0.49
Clcn3-203ENSMUST00000093490 CenppQ9CZ92 286 aa18.11■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Tbc1d7Q9D0K0 293 aa18.11■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Map3k4O08648 1597 aa18.11■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Trap1aP19473 224 aa18.11■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Znf704Q9ERQ3 566 aa18.11■□□□□ 0.49
Clcn3-203ENSMUST00000093490 DlatQ8BMF4 642 aa18.11■□□□□ 0.49
Clcn3-203ENSMUST00000093490 AatkQ80YE4 1365 aa18.11■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms