RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Ano6Q6P9J9 911 aa13.73□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Ccdc94Q9D6J3 314 aa13.73□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Tbc1d8Q9Z1A9 1134 aa13.73□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Pik3c2aQ61194 1686 aa13.73□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Map2P20357 1828 aa13.73□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Slain2Q8CI08 581 aa13.73□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Bicc1Q99MQ1 977 aaKnown RBP13.73□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Sh3bgrQ9WUZ7 214 aa13.73□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Lnx1O70263 728 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 AppP12023 770 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Dhx38Q80X98 1228 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Ubr1O70481 1757 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Gm973E9Q295 1059 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Ercc3P49135 783 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Kank4Q6P9J5 1016 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 SympkQ80X82 1284 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Me3Q8BMF3 604 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Adcy9P51830 1353 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Wdr33Q8K4P0 1330 aaKnown RBP13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Cspp1B2RX88 1205 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Nucb2P81117 420 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Leo1Q5XJE5 667 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Rassf8Q8CJ96 419 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Chmp7Q8R1T1 451 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Acsbg1Q99PU5 721 aa13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Bag3Q9JLV1 577 aaKnown RBP13.72□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Ubash3aQ3V3E1 624 aa13.71□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Oxsr1Q6P9R2 527 aa13.71□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Sass6Q80UK7 654 aa13.71□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Ppp1r37Q8BKR5 712 aa13.71□□□□□ -0.21
Col9a1-202ENSMUST00000088349 NmiO35309 314 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Atp2b3Q0VF55 1220 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Zfp113Q8C689 439 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Bloc1s2Q9CWG9 143 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 FanccP50652 591 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Oas2E9Q9A9 742 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Ubap1lG3UW59 384 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Eef2kO08796 724 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 RdxP26043 583 aaKnown RBP13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Igflr1Q3U4N7 345 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Zfp251Q6PCX8 632 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 OptnQ8K3K8 584 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Atg3Q9CPX6 314 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Sh3bp5Q9Z131 463 aa13.7□□□□□ -0.22
Col9a1-202ENSMUST00000088349 U2af2P26369 475 aaKnown RBP13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Ccdc162pQ0VG85 912 aa13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Irf9Q61179 399 aa13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 ZwintQ9CQU5 252 aa13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Pdzd9Q9D9M4 266 aa13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Psma5Q9Z2U1 241 aaKnown RBP13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Abcc4E9Q236 1325 aa13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 AceP09470 1312 aa13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Kansl3A2RSY1 903 aaKnown RBP13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Gimap6Q8K349 305 aa13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Atf7Q8R0S1 413 aa13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Krt85Q9Z2T6 507 aa13.69□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Rnf20Q5DTM8 973 aa13.68□□□□□ -0.22
Col9a1-202ENSMUST00000088349 TrhQ62361 256 aa13.68□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Ppp6r1Q7TSI3 856 aa13.68□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Nop14Q8R3N1 860 aaKnown RBP13.68□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Cep57l1Q8VDS7 400 aa13.68□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Wdr17E9Q271 1322 aa13.68□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Cfap157Q0VFX2 523 aa13.68□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Ifit1Q64282 463 aa13.68□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Irx4Q9QY61 515 aa13.68□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Kcnb2A6H8H5 907 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Grm8P47743 908 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Ctdnep1Q3TP92 244 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Lins1Q3U1D0 764 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 GpkowQ56A08 488 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Pde3bQ61409 1100 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Larp1Q6ZQ58 1072 aaKnown RBP13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Dmrt2Q8BG36 561 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Farp2Q91VS8 1065 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Kcnh5Q920E3 988 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 PsapQ61207 557 aaKnown RBP13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Rps6kb1Q8BSK8 525 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Chmp3Q9CQ10 224 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Slit2Q9R1B9 1521 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Adora1Q60612 326 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Cnpy2Q9QXT0 182 aa13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 N4bp2F8VQG7 1678 aaKnown RBP13.67□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Card6E9PWH2 1175 aa13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Hoxa7P02830 229 aa13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Cdkn1cP49919 348 aa13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Scaf1Q5U4C3 1256 aaKnown RBP13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Sp8Q8BMJ8 486 aa13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Plcd1Q8R3B1 756 aa13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Speer4bQ9D9F7 267 aa13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Ahnak2E9PYB0 1738 aaKnown RBP13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Ltv1Q6NSQ7 470 aaKnown RBP13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 ThemisQ8BGW0 636 aa13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Ano1Q8BHY3 960 aa13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Col16a1Q8BLX7 1580 aa13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Mybbp1aQ7TPV4 1344 aaKnown RBP13.66□□□□□ -0.22
Col9a1-202ENSMUST00000088349 1700006A11RikB9EHI3 544 aa13.65□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Arid5bQ8BM75 1188 aaKnown RBP13.65□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Q8C5K5 320 aa13.65□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Col1a2Q01149 1372 aa13.65□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Adam1aQ60813 791 aa13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms