RNA–Protein interactions for RNA: ENSMUST00000085096.9

Ccdc88c-202, Transcript of Protein Daple, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ccdc88c, Length 6,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-202ENSMUST00000085096 Hoxb7P09024 217 aa17.3■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Cdkl5Q3UTQ8 938 aa17.3■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Card10P58660 1021 aa17.29■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 AU019823E9PUQ3 292 aa17.29■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Gtpbp6Q3U6U5 514 aa17.29■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Secisbp2lQ6A098 1086 aaKnown RBP17.29■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Stox1B2RQL2 990 aa17.29■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Zkscan1Q8BGS3 561 aaKnown RBP17.29■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Sh3tc1G3X9F6 1346 aa17.29■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Robo2Q7TPD3 1470 aa17.28■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Naa16Q9DBB4 864 aa17.28■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Hdac9Q99N13 588 aa17.28■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Rnf216P58283 853 aa17.28■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Cul5Q9D5V5 780 aa17.28■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Gas2l3Q3UWW6 683 aa17.28■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Cap2Q9CYT6 476 aa17.28■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Abcc3B2RX12 1523 aa17.28■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Vamp4O70480 141 aa17.28■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Krt85Q9Z2T6 507 aa17.28■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Adgrl1Q80TR1 1466 aa17.27■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Calcoco2A2A6M5 331 aa17.27■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Dnmt1P13864 1620 aaKnown RBP17.27■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Nup88Q8CEC0 753 aaKnown RBP17.27■□□□□ 0.36
Ccdc88c-202ENSMUST00000085096 Gpr162Q3UN16 588 aa17.27■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Becn1O88597 448 aa17.27■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Krt25Q8VCW2 446 aa17.27■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Atp2b1G5E829 1220 aa17.26■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Rbm27Q5SFM8 1060 aaKnown RBP17.26■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Hs6st3Q9QYK4 470 aa17.26■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Sptbn5F6UCX4 1208 aa17.26■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Cep57l1Q8VDS7 400 aa17.26■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Lrrc2Q8VDB8 371 aa17.26■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Pdcl3Q8BVF2 240 aa17.26■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Pm20d1Q8C165 503 aa17.26■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Tango6Q8C3S2 1079 aa17.26■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Pik3ap1Q9EQ32 811 aa17.26■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Kif3aP28741 701 aa17.25■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Trim27Q62158 513 aa17.25■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 RgmbQ7TQ33 436 aa17.25■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Popdc2Q9ES82 367 aa17.25■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Olfml1Q8BSH2 233 aa17.25■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Armc3A2AU72 881 aa17.25■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Ppp1r3fQ9JIG4 799 aa17.25■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Trpm2Q91YD4 1506 aa17.24■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 PigbQ9JJQ0 542 aa17.24■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Q8C6G1 249 aa17.24■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Metap2O08663 478 aaKnown RBP17.24■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Rad17Q6NXW6 688 aa17.24■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Sestd1Q80UK0 696 aa17.24■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Frmd3Q8BHD4 595 aa17.24■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Hspa1lP16627 641 aa17.24■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Znf131Q8K3J5 619 aa17.24■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Traf3ip1Q149C2 625 aa17.24■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Tom1l2Q5SRX1 507 aa17.24■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 EvcP57680 1005 aa17.23■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Sap30bpQ02614 308 aa17.23■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Mdh1bQ5F204 500 aa17.23■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Nphp3Q7TNH6 1325 aa17.23■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Nfxl1E9Q8I7 918 aaKnown RBP17.23■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Cdan1Q8CC12 1239 aa17.23■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Vps16Q920Q4 839 aa17.23■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Nphp4P59240 1425 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Cdca8Q8BHX3 289 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Snrpa1P57784 255 aaKnown RBP17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Adora1Q60612 326 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Epb41l3Q9WV92 929 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Bin1O08539 588 aaKnown RBP17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Abcd1P48410 736 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 DlatQ8BMF4 642 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Fez1Q8K0X8 392 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Pagr1bF6V0H0 108 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Atp8b2P98199 1209 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Lrrc43Q3V0L5 667 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Pagr1aQ99L02 253 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Wdr63B2RY71 923 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Wdr70Q3TWF6 657 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Zmynd15Q8C0R7 736 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Zcrb1Q9CZ96 217 aaKnown RBP17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Nol7Q9D7Z3 254 aaKnown RBP17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Eid1Q9DCR4 169 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Hmgn5Q9JL35 406 aa17.22■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Gcom1E9PZ54 550 aa17.21■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Mcm3P25206 812 aaKnown RBP17.21■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 MyzapQ3UIJ9 466 aa17.21■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Ier5O89113 308 aa17.21■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Lrrfip2Q91WK0 415 aa17.21■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Pim2Q62070 370 aa17.21■□□□□ 0.35
Ccdc88c-202ENSMUST00000085096 Cdc42bpaQ3UU96 1719 aa17.21■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 Prdm1Q60636 856 aa17.2■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 Sh3d21Q7TSG5 549 aa17.2■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 Wasf1Q8R5H6 559 aa17.2■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 Foxo3Q9WVH4 672 aa17.2■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 Ccdc173A0JLY1 547 aa17.2■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 NppbP40753 121 aa17.2■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 Nsd3Q6P2L6 1439 aa17.2■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 Xrcc4Q924T3 326 aa17.2■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 Mdm2P23804 489 aa17.2■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 Myl10Q62082 202 aa17.2■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 Lrrc59Q922Q8 307 aaKnown RBP17.2■□□□□ 0.34
Ccdc88c-202ENSMUST00000085096 Ccdc66Q6NS45 935 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms