RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Sv2bQ8BG39 683 aa15.56■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Ccar1Q8CH18 1146 aaKnown RBP15.56■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Spire2Q8K1S6 718 aa15.56■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 WaslQ91YD9 501 aa15.56■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 UvssaQ9D479 717 aa15.56■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 4931408C20RikE9PWP9 1381 aa15.56■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Pappa2E9PZ87 1789 aa15.55■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Nrxn2E9Q7X7 1710 aa15.55■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Heg1E9Q7X6 1337 aa15.55■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Flt1P35969 1333 aa15.55■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Zc3h15Q3TIV5 426 aaKnown RBP15.55■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Myo3bQ1EG27 1305 aa15.54■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Akap2O54931 893 aa15.54■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Cops6O88545 324 aa15.54■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Plcb3P51432 1234 aaKnown RBP15.54■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Vil1Q62468 827 aa15.54■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Fkbp5Q64378 456 aa15.54■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Plekhm2Q80TQ5 1018 aa15.54■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Ptcd1Q8C2E4 695 aaKnown RBP15.54■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Cwc25Q9DBF7 416 aa15.54■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Zdbf2Q5SS00 2493 aaKnown RBP15.54■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Phrf1A6H619 1682 aa15.54■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Bend3Q6PAL0 825 aa15.53■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Rasgrp4Q8BTM9 673 aa15.53■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Fam213aQ9CYH2 218 aa15.53■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Fam122aQ9DB52 284 aa15.53■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Gja10Q9WUS4 505 aa15.53■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Ltn1Q6A009 1767 aa15.53■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Vsig10D3YX43 558 aa15.52■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Csf1rP09581 977 aa15.52■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Aplp1Q03157 653 aa15.52■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Best3Q6H1V1 669 aa15.52■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Rbm17Q8JZX4 405 aaKnown RBP15.52■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Stard3nlQ9DCI3 235 aa15.52■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Bend4P86174 541 aa15.51■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Zbtb38Q3LR78 1197 aa15.51■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Rad21Q61550 635 aaKnown RBP15.51■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Ccdc60Q8C4J0 545 aa15.51■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Ttc5Q99LG4 440 aa15.51■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Lrch1P62046 709 aa15.5■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Rbm5Q91YE7 815 aaKnown RBP15.5■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Col3a1P08121 1464 aa15.5■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Aifm3Q3TY86 605 aa15.49■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Cyp7a1Q64505 503 aa15.49■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Lgr5Q9Z1P4 907 aa15.49■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Kiaa0232Q80U59 1396 aaKnown RBP15.49■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 NinQ61043 2035 aa15.48■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 EvplQ9D952 2035 aa15.48■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 NmiO35309 314 aa15.48■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 XpcP51612 930 aa15.48■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Eva1cP58659 440 aa15.48■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Cyp2ab1S4R196 498 aa15.48■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Map3k15A2AQW0 1331 aa15.47■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Gm6268A2A3U9 297 aa15.47■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Exoc6bA6H5Z3 810 aa15.47■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Gm7347D3YYI9 267 aa15.47■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Oas2E9Q9A9 742 aa15.47■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Speer4aF8VPX6 267 aa15.47■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Dok7Q18PE0 504 aa15.47■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Rapgefl1Q68EF8 662 aa15.47■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 GptQ8QZR5 496 aa15.47■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Adarb2Q9JI20 745 aa15.47■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Lmbr1lQ9D1E5 489 aa15.46■□□□□ 0.07
Ccdc28a-202ENSMUST00000080860 Psme4Q5SSW2 1843 aa15.45■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 NfixP70257 488 aa15.45■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 G3bp1P97855 465 aaKnown RBP15.45■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Eif4g2Q62448 906 aaKnown RBP15.45■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Sde2Q8K1J5 448 aaKnown RBP15.45■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Tspoap1Q7TNF8 1846 aa15.45■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Thsd7bQ6P4U0 1607 aa15.44■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 CanxP35564 591 aaKnown RBP15.44■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Rps8P62242 208 aaKnown RBP15.44■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Igflr1Q3U4N7 345 aa15.44■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Glg1Q61543 1175 aaKnown RBP15.44■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Dydc2Q9D3X8 139 aa15.44■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 NynrinQ5DTZ0 1840 aa15.43■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Zap70P43404 618 aa15.43■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Grm8P47743 908 aa15.43■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Ly6iQ9WU67 134 aa15.43■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Col1a1P11087 1453 aa15.43■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Psmd1Q3TXS7 953 aa15.42■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Mphosph10Q810V0 681 aaKnown RBP15.42■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Kif2cQ922S8 721 aa15.42■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Stk32bQ9JJX8 414 aa15.42■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Mical3Q8CJ19 1993 aa15.42■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Trpm7Q923J1 1863 aa15.42■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Ecm29Q6PDI5 1840 aa15.41■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Ube4aE9Q735 1028 aa15.41■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Trim34bJ3QNR8 485 aa15.41■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Chrna5Q2MKA5 467 aa15.41■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Q3UPC7 1272 aa15.41■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 CbarpQ66L44 698 aa15.41■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Gpr101Q80T62 511 aa15.41■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Slc39a11Q8BWY7 342 aa15.41■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Ttc19Q8CC21 365 aa15.41■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Myoz2Q9JJW5 264 aa15.41■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Nlrp9bQ66X22 1003 aa15.4■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Ofd1Q80Z25 1017 aa15.4■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 McamQ8R2Y2 648 aaKnown RBP15.4■□□□□ 0.06
Ccdc28a-202ENSMUST00000080860 Naa16Q9DBB4 864 aa15.4■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms