RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Tpm3P21107 285 aaKnown RBP11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Cul9Q80TT8 1865 aa11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Nucb1Q02819 459 aaKnown RBP11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Nup88Q8CEC0 753 aaKnown RBP11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Fam13bQ8K2H3 851 aa11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Krt85Q9Z2T6 507 aa11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Irgm2A0A140LIF8 407 aa11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Pnmal2G3X9N3 661 aa11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 GalcP54818 684 aa11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 TnmdQ9EP64 317 aa11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 AceP09470 1312 aa11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Gnat3Q3V3I2 354 aa11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 LlphQ9D945 130 aaKnown RBP11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Brwd3A2AHJ4 1799 aa11.68□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Atp8b2P98199 1209 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 SympkQ80X82 1284 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Kif13aQ9EQW7 1749 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Cps1Q8C196 1500 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Nwd1A6H603 1563 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Fam184aE9PW83 1143 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Hap1O35668 628 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Znf526Q8BI66 675 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Lmtk3Q5XJV6 1424 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Gm7347D3YYI9 267 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Speer4aF8VPX6 267 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Gsdma2Q32M21 443 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Aifm3Q3TY86 605 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Odf2lQ9D478 642 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Bag3Q9JLV1 577 aaKnown RBP11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Slx1bQ8BX32 270 aa11.67□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Simc1E9Q6E9 1354 aa11.66□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 DccP70211 1447 aa11.66□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Gabpb2P81069 414 aa11.66□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Fsd1Q7TPM6 496 aa11.66□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Mrps27Q8BK72 415 aaKnown RBP11.66□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Tomm22Q9CPQ3 142 aa11.66□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Rrs1Q9CYH6 365 aaKnown RBP11.66□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Bcl2l12Q9D3J3 255 aa11.66□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Mctp1E9PV86 951 aa11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Igflr1Q3U4N7 345 aa11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Stk38Q91VJ4 465 aa11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Erc1Q99MI1 1120 aa11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 4931400O07RikQ9D4M5 137 aa11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Il1rapl2Q9ERS6 686 aa11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Atp7bQ64446 1462 aa11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 MaddQ80U28 1577 aa11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Agtpbp1Q641K1 1218 aa11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 HmcesQ8R1M0 353 aaKnown RBP11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 IncenpQ9WU62 880 aa11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Adamtsl3G3UXC7 1706 aa11.65□□□□□ -0.54
Cpsf1-201ENSMUST00000071898 Nop14Q8R3N1 860 aaKnown RBP11.65□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 CalcaP70160 136 aa11.64□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 SnrkQ8VDU5 748 aa11.64□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Lmbr1lQ9D1E5 489 aa11.64□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Eif4a1P60843 406 aaKnown RBP11.64□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Mcmdc2E9Q956 681 aa11.64□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Ppp1r37Q8BKR5 712 aa11.64□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Rcan3Q9JKK0 239 aa11.64□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 A0A1L1SQF0 893 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Taf3Q5HZG4 932 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Cap2Q9CYT6 476 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 TrhQ62361 256 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Pms1Q8K119 917 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Fam213aQ9CYH2 218 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Krt82Q99M74 516 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Stx6Q9JKK1 255 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 P2rx7Q9Z1M0 595 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Rps6ka4Q9Z2B9 773 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Kcnh4A2A5F7 1018 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Ccp110Q7TSH4 1004 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Bloc1s4Q8VED2 215 aa11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Bicc1Q99MQ1 977 aaKnown RBP11.63□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Ppfia1B2RXQ2 1266 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Samd1D3YXK1 519 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Zfp91Q62511 572 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Spty2d1Q68FG3 682 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Kiaa0753Q6A000 959 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Pmfbp1Q9WVQ0 1022 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Tpm1P58771 284 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Glg1Q61543 1175 aaKnown RBP11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Slc14a2Q8R4T9 930 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Polr3dQ91WD1 398 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Prdm11A2AGX3 565 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Mcm3P25206 812 aaKnown RBP11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Washc4Q3UMB9 1173 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 RestQ8VIG1 1082 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Cyp2ab1S4R196 498 aa11.62□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 MeiocA2AG06 965 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Q4VA45 678 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Rbm28Q8CGC6 750 aaKnown RBP11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Dydc2Q9D3X8 139 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Foxo3Q9WVH4 672 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Pde3aQ9Z0X4 1141 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Col14a1Q80X19 1797 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Atp10bB1AWN4 1474 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Cfap58B2RW38 873 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Grm8P47743 908 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Slx4ipQ9D7Y9 413 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Plekho1Q9JIY0 408 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Zbtb22Q9Z0G7 638 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms