RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Nphp3Q7TNH6 1325 aa12.79□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Gbp6A0A0G2JDV3 611 aa12.79□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Gm43302L7N1X8 611 aa12.79□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Serpinc1P32261 465 aa12.79□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Rnf168Q80XJ2 565 aa12.79□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Hdac9Q99N13 588 aa12.79□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Zfp213E9QAW0 468 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 VimP20152 466 aaKnown RBP12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Ssrp1Q08943 708 aaKnown RBP12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Agbl1Q09M05 972 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Ano10Q8BH79 659 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Polr3dQ91WD1 398 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Speer4bQ9D9F7 267 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Pde4bB1AWC9 736 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Gsta4P24472 222 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Kif5aP33175 1027 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Cavin2Q63918 418 aaKnown RBP12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Mum1Q6DID5 682 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Clasp2Q8BRT1 1286 aaKnown RBP12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Msantd4Q91YU3 345 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 4931400O07RikQ9D4M5 137 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Rai14Q9EP71 979 aaKnown RBP12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Rab3gap2Q8BMG7 1366 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Nedd9O35177 833 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Dnajc8Q6NZB0 253 aaKnown RBP12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Bank1Q80VH0 783 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Gimap6Q8K349 305 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Gigyf1Q99MR1 1044 aaKnown RBP12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Haus2Q9CQS9 234 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Ccdc7Q9D541 371 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Tuft1O08970 390 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 S100bP50114 92 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Wdhd1P59328 1117 aa12.78□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Ift88Q61371 824 aa12.77□□□□□ -0.36
Rtn3-202ENSMUST00000065304 EsrrbQ61539 433 aa12.77□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Epb41l3Q9WV92 929 aa12.77□□□□□ -0.36
Rtn3-202ENSMUST00000065304 Sos1Q62245 1319 aa12.77□□□□□ -0.36
Rtn3-202ENSMUST00000065304 ZfaP23607 742 aa12.77□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Cpa2Q504N0 417 aa12.77□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Cage1Q5IR70 849 aa12.77□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Zmat2Q9CPW7 199 aa12.77□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Ccdc94Q9D6J3 314 aa12.77□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Nop56Q9D6Z1 580 aaKnown RBP12.77□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Tfip11Q9ERA6 838 aaKnown RBP12.77□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Ranbp1P34022 203 aaKnown RBP12.77□□□□□ -0.37
Rtn3-202ENSMUST00000065304 SbdsP70122 250 aa12.77□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Tmem132aQ922P8 1018 aa12.77□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Atp2b2Q9R0K7 1198 aa12.77□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Snx25Q3ZT31 840 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Atad2bE9Q166 1460 aaKnown RBP12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Bfsp1A2AMT1 669 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Apol7bB1AQP7 369 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 ClgnP52194 611 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Psmd6Q99JI4 389 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Bcl11bQ99PV8 884 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 B4galnt4Q766D5 1034 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Trerf1Q8BXJ2 1205 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Brf1Q8CFK2 676 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Ubxn1Q922Y1 297 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 CacybpQ9CXW3 229 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Gipc1Q9Z0G0 333 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Diaph2O70566 1098 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Zbtb16Q3UQ17 673 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Mctp2Q5RJH2 878 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 4930572O03RikQ8C5Y0 211 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Rab44Q8CB87 725 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Trim68Q8K243 485 aa12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 NgdnQ9DB96 315 aaKnown RBP12.76□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Lrrc23O35125 340 aa12.75□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Tubb2aQ7TMM9 445 aa12.75□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Tmem67Q8BR76 992 aa12.75□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Tubb2bQ9CWF2 445 aa12.75□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Fam186bD3Z420 943 aa12.75□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Bin1O08539 588 aaKnown RBP12.75□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Capn2O08529 700 aa12.75□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Dapk3O54784 448 aa12.75□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Sem1P60897 70 aa12.75□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Itgb1bp2Q9R000 350 aa12.75□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Trove2O08848 538 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 P4ha1Q60715 534 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Micall1Q8BGT6 870 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Slc26a8Q8R0C3 999 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 IqcdQ9D3V1 458 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Stx6Q9JKK1 255 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Usp25P57080 1055 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Spats2Q8K1N4 545 aaKnown RBP12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Ndufab1Q9CR21 156 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 CenppQ9CZ92 286 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Cux2P70298 1426 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 HscbQ8K3A0 234 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Dpf1Q9QX66 387 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Svs3aF2Z472 265 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Zfp444Q3TDV8 331 aaKnown RBP12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Znf365Q8BG89 408 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Fam114a2Q8VE88 497 aa12.74□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Mrpl44Q9CY73 333 aaKnown RBP12.73□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Egfl6Q9JJZ5 550 aa12.73□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Puf60Q3UEB3 564 aaKnown RBP12.73□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Taok1Q5F2E8 1001 aa12.73□□□□□ -0.37
Rtn3-202ENSMUST00000065304 Klhl30Q8C3F7 581 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms