RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Fkbp5Q64378 456 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Anp32cQ64G17 123 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Tex2Q6ZPJ0 1128 aaKnown RBP11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 SympkQ80X82 1284 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Cfap99A0A140LIX9 648 aa11.46□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Cnksr1A2A9K7 700 aa11.46□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Bin1O08539 588 aaKnown RBP11.46□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Hspa2P17156 633 aa11.46□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Wdr93Q402B2 695 aa11.46□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 CoilQ5SU73 570 aa11.46□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Cfap58B2RW38 873 aa11.46□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Drc7Q6V3W6 876 aa11.46□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Rec8Q8C5S7 591 aa11.46□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Stk38Q91VJ4 465 aa11.46□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Rbbp8nlA2ABX0 614 aa11.46□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Tyro3P55144 880 aa11.46□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Zfp51Q3U4L8 781 aa11.46□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Wdr17E9Q271 1322 aa11.46□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Znf541Q0GGX2 1363 aa11.46□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Pkp1P97350 728 aaKnown RBP11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Igflr1Q3U4N7 345 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Ubash3aQ3V3E1 624 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Vps54Q5SPW0 977 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Dhx38Q80X98 1228 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 ThemisQ8BGW0 636 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Wdr24Q8CFJ9 790 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Rhot2Q8JZN7 620 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Nphp3Q7TNH6 1325 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Usp32F8VPZ3 1604 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Bend3Q6PAL0 825 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Sass6Q80UK7 654 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Zscan22Q8BGS5 496 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Ano1Q8BHY3 960 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Igsf1Q7TQA1 1317 aa11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Rreb1Q3UH06 1700 aaKnown RBP11.45□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 4930407I10RikD3Z5T8 1512 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Cyp2d11P24457 504 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Stat1P42225 749 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Irf5P56477 497 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 SrrtQ99MR6 875 aaKnown RBP11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Tpm3P21107 285 aaKnown RBP11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Ifit1Q64282 463 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Larp1Q6ZQ58 1072 aaKnown RBP11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Slc5a1Q8C3K6 665 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Lmbrd2Q8C561 694 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Cnpy2Q9QXT0 182 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Taf7Q9R1C0 341 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Tmem67Q8BR76 992 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 4930572O03RikQ8C5Y0 211 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Tbc1d7Q9D0K0 293 aa11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Prdm2A2A7B5 1709 aaKnown RBP11.44□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 NmiO35309 314 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Itsn1Q9Z0R4 1714 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Ptgs1P22437 602 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Cd22P35329 862 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Dnajc2P54103 621 aaKnown RBP11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Ccdc158Q8CDI6 1109 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Stard3nlQ9DCI3 235 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Pik3c2bE9QAN8 1632 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Ugt1a5B2RT14 529 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Gas2l3Q3UWW6 683 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Ankib1Q6ZPS6 1085 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Mrpl50Q8VDT9 159 aaKnown RBP11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Pdzd9Q9D9M4 266 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Nwd1A6H603 1563 aa11.43□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Me1P06801 572 aa11.42□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 CrklP47941 303 aa11.42□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Me3Q8BMF3 604 aa11.42□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Nucb2P81117 420 aa11.42□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 PigbQ9JJQ0 542 aa11.42□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Tbc1d8Q9Z1A9 1134 aa11.42□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Zc3h13E9Q784 1729 aaKnown RBP11.42□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Timm10P62073 90 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Limch1Q3UH68 1057 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Q8BT18 775 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Ift57Q8BXG3 429 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Eif3bQ8JZQ9 803 aaKnown RBP11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Lrrfip2Q91WK0 415 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 A0A0U1RNP2 1173 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Ttll7A4Q9F0 912 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Larp6Q8BN59 492 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Taf5lQ91WQ5 589 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Syt10Q9R0N4 523 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 TrhQ62361 256 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Fam170aQ66LM6 333 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Slu7Q8BHJ9 585 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Srek1Q8BZX4 494 aaKnown RBP11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Mknk2Q8CDB0 459 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Gys2Q8VCB3 704 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Grpel1Q99LP6 217 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Erc1Q99MI1 1120 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Ncoa4Q5U4H9 625 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Adora1Q60612 326 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Rufy2Q8R4C2 606 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Srgap1Q91Z69 1062 aa11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Mrps25Q9D125 171 aaKnown RBP11.41□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Gtf2f1Q3THK3 508 aaKnown RBP11.4□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Smg7Q5RJH6 1138 aaKnown RBP11.4□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Ano8Q6PB70 1060 aa11.4□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Flad1Q8R123 492 aa11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms