RNA–Protein interactions for RNA: ENSMUST00000056601.10

Vps53-201, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps53, Length 2,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-201ENSMUST00000056601 Abcc4E9Q236 1325 aa17.15■□□□□ 0.34
Vps53-201ENSMUST00000056601 Atp8b3Q6UQ17 1335 aa17.15■□□□□ 0.34
Vps53-201ENSMUST00000056601 Lins1Q3U1D0 764 aa17.15■□□□□ 0.34
Vps53-201ENSMUST00000056601 Atf7Q8R0S1 413 aa17.15■□□□□ 0.34
Vps53-201ENSMUST00000056601 Iffo2Q8R2V2 512 aa17.15■□□□□ 0.34
Vps53-201ENSMUST00000056601 Frmd3Q8BHD4 595 aa17.14■□□□□ 0.33
Vps53-201ENSMUST00000056601 Slc26a8Q8R0C3 999 aa17.14■□□□□ 0.33
Vps53-201ENSMUST00000056601 RictorQ6QI06 1708 aa17.14■□□□□ 0.33
Vps53-201ENSMUST00000056601 Card6E9PWH2 1175 aa17.14■□□□□ 0.33
Vps53-201ENSMUST00000056601 Hmx1O70218 332 aa17.14■□□□□ 0.33
Vps53-201ENSMUST00000056601 Dync1i1O88485 628 aa17.14■□□□□ 0.33
Vps53-201ENSMUST00000056601 Mdm2P23804 489 aa17.14■□□□□ 0.33
Vps53-201ENSMUST00000056601 Rnf20Q5DTM8 973 aa17.14■□□□□ 0.33
Vps53-201ENSMUST00000056601 Plcd1Q8R3B1 756 aa17.14■□□□□ 0.33
Vps53-201ENSMUST00000056601 Col16a1Q8BLX7 1580 aa17.14■□□□□ 0.33
Vps53-201ENSMUST00000056601 Adcy9P51830 1353 aa17.13■□□□□ 0.33
Vps53-201ENSMUST00000056601 Lnx1O70263 728 aa17.13■□□□□ 0.33
Vps53-201ENSMUST00000056601 Ets1P27577 440 aa17.13■□□□□ 0.33
Vps53-201ENSMUST00000056601 Zpr1Q62384 459 aa17.13■□□□□ 0.33
Vps53-201ENSMUST00000056601 Btbd11Q6GQW0 1109 aa17.13■□□□□ 0.33
Vps53-201ENSMUST00000056601 ZwintQ9CQU5 252 aa17.13■□□□□ 0.33
Vps53-201ENSMUST00000056601 Ubash3aQ3V3E1 624 aa17.13■□□□□ 0.33
Vps53-201ENSMUST00000056601 Ifi35Q9D8C4 286 aa17.13■□□□□ 0.33
Vps53-201ENSMUST00000056601 Bag3Q9JLV1 577 aaKnown RBP17.12■□□□□ 0.33
Vps53-201ENSMUST00000056601 Arfgef2A2A5R2 1792 aa17.12■□□□□ 0.33
Vps53-201ENSMUST00000056601 FosbP13346 338 aa17.12■□□□□ 0.33
Vps53-201ENSMUST00000056601 CtifQ6PEE2 600 aaKnown RBP17.12■□□□□ 0.33
Vps53-201ENSMUST00000056601 Ubxn10Q8BG34 277 aa17.12■□□□□ 0.33
Vps53-201ENSMUST00000056601 Nlrp3Q8R4B8 1033 aa17.12■□□□□ 0.33
Vps53-201ENSMUST00000056601 Rps6kb1Q8BSK8 525 aa17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 Dnajc14Q921R4 703 aa17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 Abcc10Q8R4P9 1501 aa17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 Gm10563F6WIE4 79 aa17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 Sp8Q8BMJ8 486 aa17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 R3hcc1Q8BSI6 488 aa17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 CrebrfQ8CDG5 640 aaKnown RBP17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 Ccz1Q8C1Y8 480 aa17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 SnrkQ8VDU5 748 aa17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 Srgap1Q91Z69 1062 aa17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 Bicc1Q99MQ1 977 aaKnown RBP17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 Amotl1Q9D4H4 968 aa17.11■□□□□ 0.33
Vps53-201ENSMUST00000056601 Dlg5E9Q9R9 1921 aa17.1■□□□□ 0.33
Vps53-201ENSMUST00000056601 Kansl3A2RSY1 903 aaKnown RBP17.1■□□□□ 0.33
Vps53-201ENSMUST00000056601 Cdk4P30285 303 aa17.1■□□□□ 0.33
Vps53-201ENSMUST00000056601 Syt10Q9R0N4 523 aa17.1■□□□□ 0.33
Vps53-201ENSMUST00000056601 Slit3Q9WVB4 1523 aa17.1■□□□□ 0.33
Vps53-201ENSMUST00000056601 Ano1Q8BHY3 960 aa17.1■□□□□ 0.33
Vps53-201ENSMUST00000056601 Bmp2kQ91Z96 1138 aa17.1■□□□□ 0.33
Vps53-201ENSMUST00000056601 Cfap58B2RW38 873 aa17.09■□□□□ 0.33
Vps53-201ENSMUST00000056601 4930504O13RikQ8C5Z9 145 aa17.09■□□□□ 0.33
Vps53-201ENSMUST00000056601 1700113H08RikE9Q9Q5 327 aa17.09■□□□□ 0.33
Vps53-201ENSMUST00000056601 Zhx1P70121 873 aa17.09■□□□□ 0.33
Vps53-201ENSMUST00000056601 Taf3Q5HZG4 932 aa17.09■□□□□ 0.33
Vps53-201ENSMUST00000056601 AceP09470 1312 aa17.09■□□□□ 0.33
Vps53-201ENSMUST00000056601 Samd1D3YXK1 519 aa17.08■□□□□ 0.33
Vps53-201ENSMUST00000056601 Ctdnep1Q3TP92 244 aa17.08■□□□□ 0.33
Vps53-201ENSMUST00000056601 Jarid2Q62315 1234 aa17.08■□□□□ 0.33
Vps53-201ENSMUST00000056601 Scn7aB1AYL1 1681 aa17.08■□□□□ 0.32
Vps53-201ENSMUST00000056601 Eif3aP23116 1344 aaKnown RBP17.08■□□□□ 0.32
Vps53-201ENSMUST00000056601 PtprvP70289 1705 aa17.08■□□□□ 0.32
Vps53-201ENSMUST00000056601 Nfatc2ipO09130 412 aa17.08■□□□□ 0.32
Vps53-201ENSMUST00000056601 PsapQ61207 557 aaKnown RBP17.08■□□□□ 0.32
Vps53-201ENSMUST00000056601 Slc35g1Q8BY79 368 aa17.08■□□□□ 0.32
Vps53-201ENSMUST00000056601 Fam43aQ8BUP8 424 aa17.07■□□□□ 0.32
Vps53-201ENSMUST00000056601 Tlcd1Q99JT6 247 aa17.07■□□□□ 0.32
Vps53-201ENSMUST00000056601 Stat1P42225 749 aa17.07■□□□□ 0.32
Vps53-201ENSMUST00000056601 Larp1Q6ZQ58 1072 aaKnown RBP17.07■□□□□ 0.32
Vps53-201ENSMUST00000056601 Arid5bQ8BM75 1188 aaKnown RBP17.07■□□□□ 0.32
Vps53-201ENSMUST00000056601 Zfp397Q7TNK4 527 aa17.06■□□□□ 0.32
Vps53-201ENSMUST00000056601 Hook1Q8BIL5 728 aa17.06■□□□□ 0.32
Vps53-201ENSMUST00000056601 Cnpy2Q9QXT0 182 aa17.06■□□□□ 0.32
Vps53-201ENSMUST00000056601 Col1a2Q01149 1372 aa17.06■□□□□ 0.32
Vps53-201ENSMUST00000056601 Zscan29E9Q5B4 869 aa17.06■□□□□ 0.32
Vps53-201ENSMUST00000056601 Grm8P47743 908 aa17.06■□□□□ 0.32
Vps53-201ENSMUST00000056601 Osbpl5Q9ER64 874 aa17.06■□□□□ 0.32
Vps53-201ENSMUST00000056601 Nkx2-3P97334 362 aa17.06■□□□□ 0.32
Vps53-201ENSMUST00000056601 Irf9Q61179 399 aa17.06■□□□□ 0.32
Vps53-201ENSMUST00000056601 Cep135Q6P5D4 1140 aa17.06■□□□□ 0.32
Vps53-201ENSMUST00000056601 GckrQ91X44 587 aa17.06■□□□□ 0.32
Vps53-201ENSMUST00000056601 Neurod6P48986 337 aa17.05■□□□□ 0.32
Vps53-201ENSMUST00000056601 Csrnp1P59054 583 aa17.05■□□□□ 0.32
Vps53-201ENSMUST00000056601 Ppfia3P60469 1194 aa17.05■□□□□ 0.32
Vps53-201ENSMUST00000056601 Rad17Q6NXW6 688 aa17.05■□□□□ 0.32
Vps53-201ENSMUST00000056601 Rassf8Q8CJ96 419 aa17.05■□□□□ 0.32
Vps53-201ENSMUST00000056601 TatQ8QZR1 454 aa17.05■□□□□ 0.32
Vps53-201ENSMUST00000056601 Ubn2Q80WC1 1314 aa17.05■□□□□ 0.32
Vps53-201ENSMUST00000056601 Tsen34Q8BMZ5 316 aa17.05■□□□□ 0.32
Vps53-201ENSMUST00000056601 Lmbr1lQ9D1E5 489 aa17.05■□□□□ 0.32
Vps53-201ENSMUST00000056601 Aox4Q3TYQ9 1336 aa17.05■□□□□ 0.32
Vps53-201ENSMUST00000056601 Ap5z1Q3U829 807 aa17.04■□□□□ 0.32
Vps53-201ENSMUST00000056601 TfrcQ62351 763 aaKnown RBP17.04■□□□□ 0.32
Vps53-201ENSMUST00000056601 Ifit1Q64282 463 aa17.04■□□□□ 0.32
Vps53-201ENSMUST00000056601 Zfp317Q8C0Q5 607 aa17.04■□□□□ 0.32
Vps53-201ENSMUST00000056601 Ubxn4Q8VCH8 506 aa17.04■□□□□ 0.32
Vps53-201ENSMUST00000056601 Irgm2A0A140LIF8 407 aa17.04■□□□□ 0.32
Vps53-201ENSMUST00000056601 Mtx1P47802 317 aa17.04■□□□□ 0.32
Vps53-201ENSMUST00000056601 Usp28Q5I043 1051 aa17.04■□□□□ 0.32
Vps53-201ENSMUST00000056601 Ppp1r10Q80W00 888 aaKnown RBP17.04■□□□□ 0.32
Vps53-201ENSMUST00000056601 Sh3bp5Q9Z131 463 aa17.04■□□□□ 0.32
Vps53-201ENSMUST00000056601 Hmg20bQ9Z104 317 aa17.03■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms