RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Lrrc59Q922Q8 307 aaKnown RBP13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Med4Q9CQA5 270 aa13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Stk36Q69ZM6 1316 aa13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Ufl1Q8CCJ3 793 aaKnown RBP13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Ces1aE9PYP1 563 aa13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Msl1Q6PDM1 616 aa13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Iqgap3F8VQ29 1632 aa13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Ncapd2Q8K2Z4 1392 aa13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Cfap58B2RW38 873 aa13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Traf3ip1Q149C2 625 aa13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 MthfsQ9D110 203 aa13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Ptcd1Q8C2E4 695 aaKnown RBP13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Cyp2ab1S4R196 498 aa13.9□□□□□ -0.18
Pcif1-201ENSMUST00000041643 Limch1Q3UH68 1057 aa13.89□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Rbm8a2A0A0N4SUH6 174 aa13.89□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Mmp8O70138 465 aa13.89□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Ppp1r9bQ6R891 817 aaKnown RBP13.89□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Rbm8aQ9CWZ3 174 aa13.89□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Cdc42bpbQ7TT50 1713 aa13.89□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Usp19Q3UJD6 1360 aa13.89□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Slc4a4O88343 1079 aa13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Snrpa1P57784 255 aaKnown RBP13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Olfml1Q8BSH2 233 aa13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Lmod1Q8BVA4 595 aa13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 RestQ8VIG1 1082 aa13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Lmbr1Q9JIT0 490 aa13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Erbb3Q61526 1339 aa13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Terf2O35144 541 aa13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Fam170aQ66LM6 333 aa13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Rdm1Q9CQK3 281 aa13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Mrpl12Q9DB15 201 aaKnown RBP13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 AglF8VPN4 1532 aa13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 IncenpQ9WU62 880 aa13.88□□□□□ -0.19
Pcif1-201ENSMUST00000041643 ShprhQ7TPQ3 1674 aa13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 RereQ80TZ9 1558 aa13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Itga6Q61739 1091 aa13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Sh3tc1G3X9F6 1346 aa13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Kifc2O08672 792 aa13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Q4VA45 678 aa13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Setbp1Q9Z180 1582 aa13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 AceP09470 1312 aa13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Cnot6lQ8VEG6 555 aa13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 LlphQ9D945 130 aaKnown RBP13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Taok3Q8BYC6 898 aa13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Kidins220E9Q9B7 1793 aa13.87□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Prl3d2F6R3P9 224 aa13.86□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Smim5Q8BT42 78 aa13.86□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Gemin5Q8BX17 1502 aaKnown RBP13.86□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Prex1Q69ZK0 1650 aa13.86□□□□□ -0.19
Pcif1-201ENSMUST00000041643 LratQ9JI60 231 aa13.86□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Ercc6l2Q9JIM3 1537 aa13.86□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Sult6b1P0CC03 303 aa13.86□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Morc2aQ69ZX6 1030 aa13.86□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Ppfia3P60469 1194 aa13.86□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Gm21985Q6P6P5 1106 aa13.86□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Zkscan8Q8BSL0 588 aa13.86□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Igf2bp2Q5SF07 592 aaKnown RBP13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 RgmbQ7TQ33 436 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 TnrQ8BYI9 1358 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Zbtb21E9Q444 1094 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Metap2O08663 478 aaKnown RBP13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Zbtb45Q52KG4 520 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Rab3gap1Q80UJ7 981 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Tango6Q8C3S2 1079 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 SelenooQ9DBC0 667 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Vps54Q5SPW0 977 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Mybbp1aQ7TPV4 1344 aaKnown RBP13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Larp1Q6ZQ58 1072 aaKnown RBP13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Ppp1r3fQ9JIG4 799 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Gcom1E9PZ54 550 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Stat1P42225 749 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 MyzapQ3UIJ9 466 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Pram1Q6BCL1 675 aa13.85□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Itsn2Q9Z0R6 1659 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Cnksr1A2A9K7 700 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Atg3Q9CPX6 314 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Bloc1s2Q9CWG9 143 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Dbndd1Q9CZ00 160 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Irs4Q9Z0Y7 1216 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Stim1P70302 685 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Liat1Q810M6 228 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Cdan1Q8CC12 1239 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Mrpl44Q9CY73 333 aaKnown RBP13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Syce3B5KM66 88 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 CltaO08585 235 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Eif5P59325 429 aaKnown RBP13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Tceanc2Q8R2M0 207 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Stx6Q9JKK1 255 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Zbtb22Q9Z0G7 638 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Prl3d3A0A0M6L0J6 224 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Adam1aQ60813 791 aa13.84□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Zbtb43Q9DAI4 467 aa13.83□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Rlbp1Q9Z275 317 aa13.83□□□□□ -0.19
Pcif1-201ENSMUST00000041643 Slc1a4O35874 532 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Necab1Q8BG18 352 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Mrps27Q8BK72 415 aaKnown RBP13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Rbm17Q8JZX4 405 aaKnown RBP13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Foxo3Q9WVH4 672 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Eya2O08575 532 aa13.83□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Mdm2P23804 489 aa13.83□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 56.9 ms