RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Wdhd1P59328 1117 aa11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Cfap157Q0VFX2 523 aa11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Sycp1Q62209 993 aa11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Bicc1Q99MQ1 977 aaKnown RBP11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Tulp4Q9JIL5 1547 aa11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Cyp7a1Q64505 503 aa11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Larp1Q6ZQ58 1072 aaKnown RBP11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Zbtb3Q91X45 518 aa11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Metap2O08663 478 aaKnown RBP11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Cnnm2Q3TWN3 875 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Ifit1bl2Q3U687 466 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 GptQ8QZR5 496 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Ccdc112A0AUP1 442 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Nucb2P81117 420 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Pdzrn3Q69ZS0 1063 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Dusp9Q7TNL7 452 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Nos1Q9Z0J4 1429 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Adgrl3Q80TS3 1537 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 AU022751B1B0V2 589 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Api5O35841 504 aaKnown RBP11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Usp25P57080 1055 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Ripk4Q9ERK0 786 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Zbtb22Q9Z0G7 638 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Kdm6aO70546 1401 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Krt23Q99PS0 422 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Acsbg1Q99PU5 721 aa11.94□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Atp8b3Q6UQ17 1335 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Setbp1Q9Z180 1582 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Zkscan16A2ALW2 728 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Samd1D3YXK1 519 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Ddx46Q569Z5 1032 aaKnown RBP11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Ifit2Q64112 472 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 MicalclQ9D5U9 680 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Chaf1aQ9QWF0 911 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Cdc42bpaQ3UU96 1719 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Cnksr1A2A9K7 700 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Ccdc191J3QQ27 883 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Syt1P46096 421 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Gse1Q3U3C9 1213 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Lrrc45Q8CIM1 670 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Nup133Q8R0G9 1155 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Bloc1s4Q8VED2 215 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Ak2Q9WTP6 239 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Kiaa1107Q80TK0 1369 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Atp2b3Q0VF55 1220 aa11.93□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Bicdl1A0JNT9 577 aa11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Tti2Q8BGV4 512 aa11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Rufy3Q9D394 469 aa11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Mmel1Q9JLI3 765 aa11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Pdia4P08003 638 aaKnown RBP11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 SfswapQ3USH5 945 aaKnown RBP11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Nip7Q9CXK8 180 aaKnown RBP11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Utp18Q5SSI6 552 aaKnown RBP11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Nsfl1cQ9CZ44 370 aaKnown RBP11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Mroh2aD3Z750 1679 aa11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Tacc1Q6Y685 774 aa11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Ift57Q8BXG3 429 aa11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 ParvgQ9ERD8 331 aa11.92□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Tbc1d8bA3KGB4 1114 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Cfap73J3QPZ5 306 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Pafah1b1P63005 410 aaKnown RBP11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 SympkQ80X82 1284 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Cadps2Q8BYR5 1297 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Ppp6r3Q922D4 844 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Tbc1d7Q9D0K0 293 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Galntl5Q9D4M9 431 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Cdan1Q8CC12 1239 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Smtnl1Q99LM3 459 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 BrapQ99MP8 591 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Arhgap23Q69ZH9 1483 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Pa2g4P50580 394 aaKnown RBP11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Gimap8Q75N62 688 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Cyb5rlB1AS42 316 aa11.91□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Trpm2Q91YD4 1506 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 TrdnE9Q9K5 693 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 U2af1l4Q8BGJ9 220 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Gimap5Q8BWF2 308 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 IkQ9Z1M8 557 aaKnown RBP11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Dnmt1P13864 1620 aaKnown RBP11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Ppp1r21Q3TDD9 780 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 ItpripQ3TNL8 555 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Erlin2Q8BFZ9 340 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Zbtb43Q9DAI4 467 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 1700006A11RikB9EHI3 544 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Gnat2P50149 354 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Tmx3Q8BXZ1 456 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Tubb4aQ9D6F9 444 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Cyp27a1Q9DBG1 533 aa11.9□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 CrklP47941 303 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Zc3h12cQ5DTV4 884 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Kdm4aQ8BW72 1064 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Cep152A2AUM9 1736 aaKnown RBP11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Dapk3O54784 448 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Chl1P70232 1209 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 VeztQ3ZK22 780 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Cnot6lQ8VEG6 555 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Rai14Q9EP71 979 aaKnown RBP11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Abcc3B2RX12 1523 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Gm45015A0A140LII9 184 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Gm18336A0A140LIU8 765 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 83.6 ms