RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 WtapQ9ER69 396 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Tbc1d8bA3KGB4 1114 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Cacna2d4Q5RJF7 1116 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Zbtb43Q9DAI4 467 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Prim1P20664 417 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Hspa4Q61316 841 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Znf771Q8BJ90 317 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Ift74Q8BKE9 600 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Sil1Q9EPK6 465 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Mug2P28666 1451 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Pa2g4P50580 394 aaKnown RBP19.09■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Cnot6lQ8VEG6 555 aa19.09■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Trim55G3X8Y1 545 aa19.09■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Ccnl1Q52KE7 532 aaKnown RBP19.09■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Znf18Q810A1 556 aa19.09■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Triml1Q8BVP1 470 aa19.09■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Nucb2P81117 420 aa19.09■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Cfap73J3QPZ5 306 aa19.09■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Snw1Q9CSN1 536 aaKnown RBP19.09■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Nphp3Q7TNH6 1325 aa19.09■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Shroom2A2ALU4 1481 aa19.08■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Cbx1P83917 185 aaKnown RBP19.08■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Rdm1Q9CQK3 281 aa19.08■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Klhl10Q9D5V2 608 aa19.08■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Ccdc83Q9D4V3 305 aa19.08■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Ktn1Q61595 1327 aaKnown RBP19.08■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 AU019823E9PUQ3 292 aa19.08■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Igflr1Q3U4N7 345 aa19.08■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 DymQ8CHY3 669 aa19.08■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Fam213aQ9CYH2 218 aa19.08■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Cdca7Q9D0M2 382 aa19.08■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Nfxl1E9Q8I7 918 aaKnown RBP19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Snx13Q6PHS6 957 aa19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Astn2Q80Z10 1352 aa19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Slc1a4O35874 532 aa19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Cnnm2Q3TWN3 875 aa19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Znf692Q3U381 531 aa19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 AcrbpQ3V140 540 aa19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Q4VA45 678 aa19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Ano2Q8CFW1 1002 aa19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Prex2Q3LAC4 1598 aa19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Ppp1r10Q80W00 888 aaKnown RBP19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Ankrd50F7BE84 1390 aa19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Tmem143Q8VD26 458 aa19.07■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Ppip5k1A2ARP1 1436 aa19.06■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Q9D5Q8 446 aa19.06■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Pla2r1Q62028 1487 aa19.06■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Kcnj4P52189 445 aa19.06■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Kcnn1Q9EQR3 537 aa19.06■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Smarcc1P97496 1104 aa19.06■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Eya1P97767 591 aa19.06■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Ano10Q8BH79 659 aa19.06■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 DlatQ8BMF4 642 aa19.06■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Rapgef3Q8VCC8 918 aa19.06■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Ier5O89113 308 aa19.05■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Sass6Q80UK7 654 aa19.05■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 LarsQ8BMJ2 1178 aa19.05■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Hs2st1Q8R3H7 356 aa19.05■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Samd9lQ69Z37 1561 aa19.05■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Gng11P61953 73 aa19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Gm7347D3YYI9 267 aa19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Speer4aF8VPX6 267 aa19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Slc4a4O88343 1079 aa19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Cfap157Q0VFX2 523 aa19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Rbm26Q6NZN0 1012 aaKnown RBP19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Bicc1Q99MQ1 977 aaKnown RBP19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Usp5P56399 858 aaKnown RBP19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Ano1Q8BHY3 960 aa19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Sh3d21Q7TSG5 549 aa19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Nek11Q8C0Q4 628 aa19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Smc1bQ920F6 1248 aa19.04■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Dennd3A2RT67 1274 aa19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Cep135Q6P5D4 1140 aa19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Uchl5Q9WUP7 329 aa19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Sbno1Q689Z5 1390 aa19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Homer1Q9Z2Y3 366 aa19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 CalrP14211 416 aaKnown RBP19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Gse1Q3U3C9 1213 aa19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 RestQ8VIG1 1082 aa19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 WizO88286 1684 aaKnown RBP19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Pola1P33609 1465 aa19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Calml4Q91WQ9 153 aa19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Pkd2l2Q9JLG4 621 aa19.03■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Gm18336A0A140LIU8 765 aa19.02■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 F2rP30558 430 aa19.02■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Ccdc122Q8BVN0 290 aa19.02■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Prr29B1ARI9 187 aa19.02■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Tbc1d5Q80XQ2 815 aa19.02■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Ttc12Q8BW49 704 aa19.02■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Vps18Q8R307 973 aa19.02■□□□□ 0.64
Ubfd1-201ENSMUST00000033158 Gm42641I6L9G2 585 aa19.02■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 GmnnO88513 206 aa19.02■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 ArsiQ32KI9 573 aa19.02■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 AtripQ8BMG1 785 aa19.02■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ptcd1Q8C2E4 695 aaKnown RBP19.02■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 MthfsQ9D110 203 aa19.02■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Lrrc9Q8CDN9 1456 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Mdm2P23804 489 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Syt1P46096 421 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 CalcaP70160 136 aa19.01■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms