RNA–Protein interactions for RNA: ENSMUST00000029446.12

Csde1-201, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Csde1, Length 4,318 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-201ENSMUST00000029446 Brf1Q8CFK2 676 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Glipr1l2Q9CQ35 332 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Terf2O35144 541 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 MycnP03966 462 aaKnown RBP8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Adam1bQ8R534 806 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Cwc25Q9DBF7 416 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Catsper2A2ARP9 588 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Ankib1Q6ZPS6 1085 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Slc26a8Q8R0C3 999 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 RestQ8VIG1 1082 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Bicd2Q921C5 820 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Ppp6r3Q922D4 844 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Bag3Q9JLV1 577 aaKnown RBP8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 PtprvP70289 1705 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Myd88P22366 296 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Rnf20Q5DTM8 973 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Ints3Q7TPD0 1041 aaKnown RBP8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Slx1bQ8BX32 270 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Lrrc59Q922Q8 307 aaKnown RBP8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 Pard3Q99NH2 1333 aa8.32□□□□□ -1.08
Csde1-201ENSMUST00000029446 Gm973E9Q295 1059 aa8.32□□□□□ -1.08
Csde1-201ENSMUST00000029446 Nol8Q3UHX0 1147 aaKnown RBP8.32□□□□□ -1.08
Csde1-201ENSMUST00000029446 Rbm27Q5SFM8 1060 aaKnown RBP8.32□□□□□ -1.08
Csde1-201ENSMUST00000029446 Slc39a6Q8C145 765 aa8.32□□□□□ -1.08
Csde1-201ENSMUST00000029446 Flt4P35917 1363 aa8.32□□□□□ -1.08
Csde1-201ENSMUST00000029446 Hdgfl1Q2VPR5 283 aa8.32□□□□□ -1.08
Csde1-201ENSMUST00000029446 Top1mtQ8R4U6 593 aa8.32□□□□□ -1.08
Csde1-201ENSMUST00000029446 SetQ9EQU5 289 aaKnown RBP8.32□□□□□ -1.08
Csde1-201ENSMUST00000029446 Larp1Q6ZQ58 1072 aaKnown RBP8.32□□□□□ -1.08
Csde1-201ENSMUST00000029446 Ubap1lG3UW59 384 aa8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Hmgb1P63158 215 aaKnown RBP8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Ttc19Q8CC21 365 aa8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Cchcr1Q8K2I2 770 aa8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Nlrp3Q8R4B8 1033 aa8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Zbtb3Q91X45 518 aa8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Rapgef4Q9EQZ6 1011 aa8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Slit1Q80TR4 1531 aa8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Ahnak2E9PYB0 1738 aaKnown RBP8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Pa2g4P50580 394 aaKnown RBP8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Mrps27Q8BK72 415 aaKnown RBP8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Slc5a4bQ91ZP4 660 aa8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Pnpla7A2AJ88 1352 aa8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Trim30aP15533 496 aa8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Anp32eP97822 260 aaKnown RBP8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Gsdma2Q32M21 443 aa8.31□□□□□ -1.08
Csde1-201ENSMUST00000029446 Adcy9P51830 1353 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 RdxP26043 583 aaKnown RBP8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 Tlr7P58681 1050 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 Tshz3Q8CGV9 1081 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 Adgrb1Q3UHD1 1582 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 Bank1Q80VH0 783 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 Q9D9S1 216 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 PigbQ9JJQ0 542 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 Cyp2d11P24457 504 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 Siglec1Q62230 1695 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 Cspp1B2RX88 1205 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 CalcaP70160 136 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 Gm12185Q5NCB2 835 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 Ppp4r3aQ6P2K6 820 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 PdiltQ9DAN1 588 aa8.3□□□□□ -1.08
Csde1-201ENSMUST00000029446 Wnk3Q80XP9 1757 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Tpx2A2APB8 745 aaKnown RBP8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Zbtb40Q6PCS8 1258 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Pm20d1Q8C165 503 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Trim52Q8CDV4 233 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Qtrt2B8ZXI1 415 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Sik1Q60670 779 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Pof1bQ8K4L4 587 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Kdm4cQ8VCD7 1054 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Fam213aQ9CYH2 218 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Psma5Q9Z2U1 241 aaKnown RBP8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Syde2E9PUP1 1314 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Ppfia1B2RXQ2 1266 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Syce3B5KM66 88 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Trim34bJ3QNR8 485 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Nom1Q3UFM5 854 aaKnown RBP8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Mctp2Q5RJH2 878 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 LlphQ9D945 130 aaKnown RBP8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Dydc1Q9D9T0 175 aa8.29□□□□□ -1.08
Csde1-201ENSMUST00000029446 Col18a1P39061 1774 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Prr29B1ARI9 187 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Klc3Q91W40 508 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Trim34aQ99PP6 485 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Nip7Q9CXK8 180 aaKnown RBP8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Scn4aQ9ER60 1841 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Sh3bp1P55194 680 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Tgfb1i1Q62219 461 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Mylk2Q8VCR8 613 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Rrs1Q9CYH6 365 aaKnown RBP8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Robo1O89026 1612 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Abcc4E9Q236 1325 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 NmiO35309 314 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Cnnm3Q32NY4 713 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Ddb1Q3U1J4 1140 aaKnown RBP8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Smim5Q8BT42 78 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Hnrnpul1Q8VDM6 859 aaKnown RBP8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Hs6st3Q9QYK4 470 aa8.28□□□□□ -1.08
Csde1-201ENSMUST00000029446 Ttll7A4Q9F0 912 aa8.27□□□□□ -1.08
Csde1-201ENSMUST00000029446 Kdm3aQ6PCM1 1323 aa8.27□□□□□ -1.09
Csde1-201ENSMUST00000029446 Ybx3Q9JKB3 361 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms