RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Ctnna2Q61301 953 aa12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 Eif3j2Q66JS6 263 aa12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 Zfp251Q6PCX8 632 aa12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 4930572O03RikQ8C5Y0 211 aa12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 Ankrd1Q9CR42 319 aa12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 Zeb2Q9R0G7 1215 aa12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 Ppfibp2O35711 882 aa12.46□□□□□ -0.42
Ciita-201ENSMUST00000023147 Map3k7clP58500 142 aa12.46□□□□□ -0.42
Ciita-201ENSMUST00000023147 Psmd1Q3TXS7 953 aa12.46□□□□□ -0.42
Ciita-201ENSMUST00000023147 Ppp6r3Q922D4 844 aa12.46□□□□□ -0.42
Ciita-201ENSMUST00000023147 Riok1Q922Q2 567 aa12.46□□□□□ -0.42
Ciita-201ENSMUST00000023147 Tbc1d8Q9Z1A9 1134 aa12.46□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gm21671G3UY31 267 aa12.46□□□□□ -0.42
Ciita-201ENSMUST00000023147 Bloc1s2Q9CWG9 143 aa12.46□□□□□ -0.42
Ciita-201ENSMUST00000023147 Hmg20bQ9Z104 317 aa12.46□□□□□ -0.42
Ciita-201ENSMUST00000023147 Znf521Q6KAS7 1311 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gm21698A0A087WQP8 267 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gm21680A0A0G2JGR8 267 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Cep135Q6P5D4 1140 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 ZgpatQ8VDM1 511 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Irgm2A0A140LIF8 407 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gle1Q8R322 699 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Ppfia1B2RXQ2 1266 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Akap2O54931 893 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Rufy2Q8R4C2 606 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Trim11Q99PQ2 467 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Efcab6Q6P1E8 1516 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Zkscan16A2ALW2 728 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Brms1Q99N20 246 aa12.45□□□□□ -0.42
Ciita-201ENSMUST00000023147 Atp8b3Q6UQ17 1335 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Atp8b2P98199 1209 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 ArsiQ32KI9 573 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Txndc16Q7TN22 820 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Itsn2Q9Z0R6 1659 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Kif2aP28740 705 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Mtmr3Q8K296 1196 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Atf7Q8R0S1 413 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Speer4bQ9D9F7 267 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Dact3Q0PHV7 610 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Q3UJC8 639 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gas2l3Q3UWW6 683 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Ccdc66Q6NS45 935 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Abcc3B2RX12 1523 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Ms4a1P19437 291 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Igf2bp2Q5SF07 592 aaKnown RBP12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Naa15Q80UM3 865 aaKnown RBP12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 4921504E06RikQ8CET2 560 aa12.44□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gm21663A0A0G2JE01 267 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 5031410I06RikE9Q4E0 267 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gm1979E9QAN3 267 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gm5862K7N5V5 267 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gm10220K7N660 267 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Ctage5Q8R311 779 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Ctnnbl1Q9CWL8 563 aaKnown RBP12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gm42641I6L9G2 585 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Tm6sf1P58749 370 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 AtripQ8BMG1 785 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Fermt2Q8CIB5 680 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Pms1Q8K119 917 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Srgap1Q91Z69 1062 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gm32742A0A1B0GT42 1604 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Limch1Q3UH68 1057 aa12.43□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gadd45bP22339 160 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 IqcgQ80W32 419 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Sugp2Q8CH09 1067 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Calml4Q91WQ9 153 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Ktn1Q61595 1327 aaKnown RBP12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Mcmdc2E9Q956 681 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Evi5lH3BKQ3 813 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Ddx10Q80Y44 875 aaKnown RBP12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gdpd2Q9ESM6 539 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Aplp1Q03157 653 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Spty2d1Q68FG3 682 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Nop53Q8BK35 484 aaKnown RBP12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Cul5Q9D5V5 780 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Wdr93Q402B2 695 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Gigyf2Q6Y7W8 1291 aaKnown RBP12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Frmd3Q8BHD4 595 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Nsfl1cQ9CZ44 370 aaKnown RBP12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Krt7Q9DCV7 457 aa12.42□□□□□ -0.42
Ciita-201ENSMUST00000023147 Utp18Q5SSI6 552 aaKnown RBP12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Ccdc42Q5SV66 316 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Skor1Q8BX46 964 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Erlin1Q91X78 346 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Lman1Q9D0F3 517 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Smco2Q9DA21 347 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Acbd3Q8BMP6 525 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Exoc6bA6H5Z3 810 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Cacna2d4Q5RJF7 1116 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Trim25Q61510 634 aaKnown RBP12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Snx13Q6PHS6 957 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Ano10Q8BH79 659 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Nol11Q8BJW5 723 aaKnown RBP12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Rab3il1Q8VDV3 383 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 RestQ8VIG1 1082 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Jakmip3Q5DTN8 844 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Iffo1Q8BXL9 562 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Slx4ipQ9D7Y9 413 aa12.41□□□□□ -0.42
Ciita-201ENSMUST00000023147 Kiaa1210E9Q0C6 1637 aa12.4□□□□□ -0.42
Ciita-201ENSMUST00000023147 Sh3d21Q7TSG5 549 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms