RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Tpm3P21107 285 aaKnown RBP13.56□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Prkar2bP31324 416 aa13.56□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Pip4k2bQ80XI4 416 aa13.56□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Elf2Q9JHC9 593 aa13.56□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Cdk4P30285 303 aa13.56□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Cwc15Q9JHS9 229 aaKnown RBP13.56□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Dnai2A2AC93 623 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Phactr2B1AVP0 632 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Zkscan7E9PVW1 718 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Adck5Q80V03 582 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Nol11Q8BJW5 723 aaKnown RBP13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Sugp2Q8CH09 1067 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Rab11fip3Q8CHD8 1047 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 FanclQ9CR14 375 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 DonsonQ9QXP4 560 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Usp25P57080 1055 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Chpf2Q3UU43 768 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 MarsQ68FL6 902 aaKnown RBP13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Hs1bp3Q3TC93 395 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Eif4g2Q62448 906 aaKnown RBP13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Saal1Q9D2C2 474 aa13.55□□□□□ -0.24
Sdc1-201ENSMUST00000020911 N4bp2F8VQG7 1678 aaKnown RBP13.54□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Chl1P70232 1209 aa13.54□□□□□ -0.24
Sdc1-201ENSMUST00000020911 HnrnpuQ8VEK3 800 aaKnown RBP13.54□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Kif20bQ80WE4 1774 aaKnown RBP13.54□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Ccdc40Q8BI79 1192 aa13.54□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Spata16Q8C636 571 aa13.54□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Cfap58B2RW38 873 aa13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Zrsr2Q62377 462 aaKnown RBP13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Zscan22Q8BGS5 496 aa13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 4930550L24RikQ99PA7 320 aa13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Stk11Q9WTK7 436 aa13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Pik3c2aQ61194 1686 aa13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 CalcaP70160 136 aa13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Cep63Q3UPP8 700 aa13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Cavin2Q63918 418 aaKnown RBP13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Smc2Q8CG48 1191 aaKnown RBP13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Nfe2l3Q9WTM4 660 aa13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 AdnpQ9Z103 1108 aaKnown RBP13.53□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Gm10471E9Q1C7 252 aa13.52□□□□□ -0.24
Sdc1-201ENSMUST00000020911 H2afxP27661 143 aaKnown RBP13.52□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Kcna4Q61423 654 aa13.52□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Fam13aQ8BGI4 693 aa13.52□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Slain2Q8CI08 581 aa13.52□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Camta1A2A891 1682 aa13.52□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Fkbp4P30416 458 aa13.52□□□□□ -0.25
Sdc1-201ENSMUST00000020911 HalP35492 657 aa13.52□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Arid3aQ62431 601 aa13.52□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Tns3Q5SSZ5 1440 aa13.51□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Samsn1P57725 372 aa13.51□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Filip1lQ6P6L0 1131 aa13.51□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Ppp6r3Q922D4 844 aa13.51□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Tlcd1Q99JT6 247 aa13.51□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Gsdma3Q5Y4Y6 464 aa13.51□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Alpk3Q924C5 1678 aa13.51□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Gm42641I6L9G2 585 aa13.51□□□□□ -0.25
Sdc1-201ENSMUST00000020911 AtripQ8BMG1 785 aa13.51□□□□□ -0.25
Sdc1-201ENSMUST00000020911 St18Q80TY4 1045 aa13.5□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Frat2Q8K025 231 aa13.5□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Creld2Q9CYA0 350 aa13.5□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Dydc1Q9D9T0 175 aa13.5□□□□□ -0.25
Sdc1-201ENSMUST00000020911 D430041D05RikF6ZGR6 1678 aa13.5□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Zkscan16A2ALW2 728 aa13.5□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Ms4a1P19437 291 aa13.5□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Nbr1P97432 988 aa13.5□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Gimap6Q8K349 305 aa13.5□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Cetn4Q8K4K1 168 aa13.5□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Ccar2Q8VDP4 922 aaKnown RBP13.5□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Map2P20357 1828 aa13.49□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Scp2P32020 547 aaKnown RBP13.49□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Lig3P97386 1015 aa13.49□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Prpf38aQ4FK66 312 aaKnown RBP13.49□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Wwc1Q5SXA9 1104 aa13.49□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Dzip1Q8BMD2 852 aa13.49□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Atp6v1aP50516 617 aaKnown RBP13.49□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Cfap157Q0VFX2 523 aa13.49□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Ube2oQ6ZPJ3 1288 aa13.49□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Cyp2d12Q8BVD2 504 aa13.49□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Pdia3P27773 505 aaKnown RBP13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 LifrP42703 1092 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 FntaQ61239 377 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Adcy2Q80TL1 1090 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Srgap3Q812A2 1099 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Mageb16Q9CWV4 363 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Letm1Q9Z2I0 738 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Col16a1Q8BLX7 1580 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 C3P01027 1663 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Ccdc155Q80VJ8 648 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Smc1aQ9CU62 1233 aaKnown RBP13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Add3Q9QYB5 706 aaKnown RBP13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Vwa3bJ9JI28 736 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Map2k1P31938 393 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Map3k13Q1HKZ5 959 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Fbxw10Q5SUS0 1030 aa13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Prc1Q99K43 603 aaKnown RBP13.48□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Wdr17E9Q271 1322 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Ubr1O70481 1757 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Arap3Q8R5G7 1538 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Nucb1Q02819 459 aaKnown RBP13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Npdc1Q64322 332 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms