RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Srgap1Q91Z69 1062 aa20.92■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Tomm22Q9CPQ3 142 aa20.92■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Rbm8aQ9CWZ3 174 aa20.92■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Dmrt2Q8BG36 561 aa20.91■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Ano10Q8BH79 659 aa20.91■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Me3Q8BMF3 604 aa20.91■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Ddx11Q6AXC6 880 aa20.91■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Slu7Q8BHJ9 585 aa20.91■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Cnpy2Q9QXT0 182 aa20.91■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Zkscan4Q5SZT6 480 aa20.91■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Mkrn3Q60764 544 aa20.91■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Tceanc2Q8R2M0 207 aa20.91■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Med1Q925J9 1575 aa20.91■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Ak2Q9WTP6 239 aa20.91■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Pnpla7A2AJ88 1352 aa20.9■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Kmt5bQ3U8K7 883 aa20.9■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Pabpn1Q8CCS6 302 aaKnown RBP20.9■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Kcnk13Q8R1P5 405 aa20.9■□□□□ 0.94
Sqstm1-201ENSMUST00000015981 Tlr7P58681 1050 aa20.89■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Arfgef2A2A5R2 1792 aa20.89■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Atf5O70191 283 aa20.89■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Ubash3aQ3V3E1 624 aa20.89■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Ubxn4Q8VCH8 506 aa20.89■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Elf2Q9JHC9 593 aa20.89■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Psma5Q9Z2U1 241 aaKnown RBP20.89■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Asxl2Q8BZ32 1370 aa20.88■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Clec11aO88200 328 aa20.88■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Csrnp1P59054 583 aa20.88■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Chpf2Q3UU43 768 aa20.88■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Pde3bQ61409 1100 aa20.88■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 R3hcc1Q8BSI6 488 aa20.88■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Casz1Q9CWL2 1761 aa20.88■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 NmiO35309 314 aa20.88■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Anks1aP59672 1150 aa20.88■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 ZwintQ9CQU5 252 aa20.88■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Fam228bQ497Q6 232 aa20.87■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Taf5lQ91WQ5 589 aa20.87■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Slit2Q9R1B9 1521 aa20.87■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Cyp2d11P24457 504 aa20.87■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Spag5Q7TME2 1165 aa20.87■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Sp8Q8BMJ8 486 aa20.87■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Polr3dQ91WD1 398 aa20.87■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Astn2Q80Z10 1352 aa20.87■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Tnnt1O88346 262 aa20.86■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Ints4Q8CIM8 964 aa20.86■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Stx1aO35526 288 aa20.86■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Trap1aP19473 224 aa20.86■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Ubxn10Q8BG34 277 aa20.86■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Hook1Q8BIL5 728 aa20.86■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Atf7Q8R0S1 413 aa20.86■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Ercc6l2Q9JIM3 1537 aa20.86■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Lcmt1A0A0U1RNF2 332 aa20.85■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 H2afxP27661 143 aaKnown RBP20.85■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Ano1Q8BHY3 960 aa20.85■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Chd2E9PZM4 1827 aaKnown RBP20.85■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Dnajc2P54103 621 aaKnown RBP20.84■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Kcnd1Q03719 651 aa20.84■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Arglu1Q3UL36 271 aaKnown RBP20.84■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 L1td1Q587J6 782 aaKnown RBP20.84■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Tshz2Q68FE9 1030 aa20.84■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Cyp2d12Q8BVD2 504 aa20.84■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Morc2aQ69ZX6 1030 aa20.84■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Pcdhb15Q91Y04 786 aa20.84■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Snw1Q9CSN1 536 aaKnown RBP20.84■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Adcy9P51830 1353 aa20.83■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Ugt1a5B2RT14 529 aa20.83■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Znf568E9PYI1 671 aa20.83■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Usp28Q5I043 1051 aa20.83■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Rps6kb1Q8BSK8 525 aa20.83■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Tbc1d4Q8BYJ6 1307 aa20.83■□□□□ 0.93
Sqstm1-201ENSMUST00000015981 Zap70P43404 618 aa20.83■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Anp32eP97822 260 aaKnown RBP20.82■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Tmem109Q3UBX0 243 aa20.82■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Panx2Q6IMP4 677 aa20.82■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Dhx40Q6PE54 779 aaKnown RBP20.82■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Samsn1P57725 372 aa20.82■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Ctdnep1Q3TP92 244 aa20.82■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Zfp317Q8C0Q5 607 aa20.82■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Rbm33Q9CXK9 1231 aaKnown RBP20.82■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Yeats2Q3TUF7 1407 aa20.82■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Parp14Q2EMV9 1817 aa20.82■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Eya1P97767 591 aa20.81■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Sox12Q04890 314 aa20.81■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Zbtb45Q52KG4 520 aa20.81■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Rnf20Q5DTM8 973 aa20.81■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Znf532Q6NXK2 1036 aa20.81■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Pnpla2Q8BJ56 486 aa20.81■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Rtel1Q0VGM9 1203 aa20.81■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Ccdc34Q3UI66 367 aa20.81■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Frat2Q8K025 231 aa20.81■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Itsn1Q9Z0R4 1714 aa20.81■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 MecomP14404 1042 aa20.81■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.8■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Rrp1P56183 494 aaKnown RBP20.8■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 CoilQ5SU73 570 aa20.8■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Atg3Q9CPX6 314 aa20.8■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Q8BZJ8 459 aa20.8■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Iffo2Q8R2V2 512 aa20.8■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Gm11983V9GXS8 105 aa20.8■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Ica1lQ3TY65 431 aa20.79■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms