RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 Cers3Q1A3B0 383 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Bbof1Q3V079 533 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Zc3h12cQ5DTV4 884 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Fam160b2Q80YR2 744 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 DlatQ8BMF4 642 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Usp5P56399 858 aaKnown RBP10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Cnot6lQ8VEG6 555 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Epb41l3Q9WV92 929 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Naip7Q9JIB3 1402 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Naip6Q9JIB6 1403 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Gm7347D3YYI9 267 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Speer4aF8VPX6 267 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ctr9Q62018 1173 aaKnown RBP10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Kiaa1524Q8BWY9 907 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Fermt2Q8CIB5 680 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Duxf3A0A0N4SV92 674 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Gjc1P28229 396 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Uspl1Q3ULM6 1089 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Gimap5Q8BWF2 308 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ncf1Q09014 390 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Vps36Q91XD6 386 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Uchl5Q9WUP7 329 aa10.56□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Trim27Q62158 513 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Pdcl2Q78Y63 240 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Cdca8Q8BHX3 289 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Frat2Q8K025 231 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ccdc12Q8R344 166 aaKnown RBP10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Tmod2Q9JKK7 351 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Dnm1P39053 867 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 RragbQ6NTA4 374 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Larp6Q8BN59 492 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 St5Q924W7 1134 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Hsf2bpQ9D4G2 338 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Taf7Q9R1C0 341 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Cnnm2Q3TWN3 875 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Skor1Q8BX46 964 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Lmbr1lQ9D1E5 489 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Tmem94Q7TSH8 1360 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Rad50P70388 1312 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Rbm8a2A0A0N4SUH6 174 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 DesP31001 469 aaKnown RBP10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Rbm26Q6NZN0 1012 aaKnown RBP10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ppp4r3aQ6P2K6 820 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Iffo1Q8BXL9 562 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Krt79Q8VED5 531 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Rbm8aQ9CWZ3 174 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Zbtb43Q9DAI4 467 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Slc4a4O88343 1079 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Tmem132eQ6IEE6 982 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Gimap8Q75N62 688 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Dph6Q9CQ28 267 aa10.55□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Nkx1-2P42580 305 aa10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Kdm5bQ80Y84 1544 aa10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Gng11P61953 73 aa10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 DymQ8CHY3 669 aa10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 StambpQ9CQ26 424 aa10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Mrps27Q8BK72 415 aaKnown RBP10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Als2cr12Q8BVM7 383 aa10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 FanclQ9CR14 375 aa10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 LifrP42703 1092 aa10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Fam83gQ5SWY7 812 aa10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Fam170aQ66LM6 333 aa10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Thoc2B1AZI6 1594 aaKnown RBP10.54□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Hdhd2Q3UGR5 259 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Brd3Q8K2F0 726 aaKnown RBP10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ctage5Q8R311 779 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 MthfsQ9D110 203 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Prpf40aQ9R1C7 953 aaKnown RBP10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Atp2b3Q0VF55 1220 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ano10Q8BH79 659 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Haus2Q9CQS9 234 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Atp2b1G5E829 1220 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Nf2P46662 596 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Atp8b2P98199 1209 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Znf697Q569E7 569 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Vps18Q8R307 973 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Cfap73J3QPZ5 306 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Nucb2P81117 420 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ankrd40Q5SUE8 363 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 HellsQ60848 821 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ift88Q61371 824 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Tbc1d5Q80XQ2 815 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Atp8b3Q6UQ17 1335 aa10.53□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Gpatch8A2A6A1 1505 aa10.52□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Grm8P47743 908 aa10.52□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ranbp6Q8BIV3 1105 aa10.52□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 GckrQ91X44 587 aa10.52□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Gse1Q3U3C9 1213 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 Krt15Q61414 452 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 Fam43aQ8BUP8 424 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 2310002L09RikQ9D7L5 217 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 Tmco5aQ9D9D5 303 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 Znf394Q9Z1D9 521 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 Terf1P70371 421 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 Ttc12Q8BW49 704 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 CenppQ9CZ92 286 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 E9QMW4 1145 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 Ercc3P49135 783 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 Ift122Q6NWV3 1182 aa10.52□□□□□ -0.73
Pdgfra-201ENSMUST00000000476 Dact3Q0PHV7 610 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms