RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 PIGUQ9H490 435 aa24.71■■□□□ 1.55
SMAD4-213ENST00000591914 GPATCH2Q9NW75 528 aa24.71■■□□□ 1.55
SMAD4-213ENST00000591914 HCFC1P51610 2035 aa24.71■■□□□ 1.55
SMAD4-213ENST00000591914 NUP214P35658 2090 aaPredicted RBP24.7■■□□□ 1.54
SMAD4-213ENST00000591914 IGLV3-32A0A0A0MS00 114 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 CD8B2A6NJW9 211 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 SDHDO14521 159 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 HDAC3O15379 428 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 SNRPB2P08579 225 aaKnown RBP24.7■■□□□ 1.54
SMAD4-213ENST00000591914 CHMP24386 653 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 CEACAM8P31997 349 aaPredicted RBP24.7■■□□□ 1.54
SMAD4-213ENST00000591914 TIMP3P35625 211 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 WNT3P56703 355 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 OCRLQ01968 901 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 TP53BP2Q13625 1128 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 GANABQ14697 944 aaKnown RBP24.7■■□□□ 1.54
SMAD4-213ENST00000591914 SPDYE7PQ495Y7 208 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 OR4F3Q6IEY1 312 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 CDC73Q6P1J9 531 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 AAGABQ6PD74 315 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 FIGNL1Q6PIW4 674 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 ZAR1Q86SH2 424 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 ZPLD1Q8TCW7 415 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 ARL8AQ96BM9 186 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 TESCQ96BS2 214 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 BTBD2Q9BX70 525 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 ACTRT3Q9BYD9 372 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 MANSC1Q9H8J5 431 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 NPDC1Q9NQX5 325 aaPredicted RBP24.7■■□□□ 1.54
SMAD4-213ENST00000591914 MED11Q9P086 117 aa24.7■■□□□ 1.54
SMAD4-213ENST00000591914 FBN2P35556 2912 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 DCHS2Q6V1P9 2916 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 HSPB2A8KAH6 182 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 ALG1L2C9J202 215 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 RNASET2O00584 256 aaKnown RBP24.69■■□□□ 1.54
SMAD4-213ENST00000591914 CFLARO15519 480 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 ANGPTL1O95841 491 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 IGFBP2P18065 325 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 TBXA2RP21731 343 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 LHX2P50458 406 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 B3GALT5-AS1P59052 145 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 C17orf67Q0P5P2 114 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 HSPB2Q16082 182 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 CLECL1Q8IZS7 167 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 TNIP2Q8NFZ5 429 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 CDS1Q92903 461 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 SFXN2Q96NB2 322 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 G6PC3Q9BUM1 346 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 TRIM8Q9BZR9 551 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 FBXO34Q9NWN3 711 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 APCP25054 2843 aa24.69■■□□□ 1.54
SMAD4-213ENST00000591914 SOX30O94993 753 aa24.68■■□□□ 1.54
SMAD4-213ENST00000591914 OXSR1O95747 527 aaPredicted RBP24.68■■□□□ 1.54
SMAD4-213ENST00000591914 KRT16P08779 473 aa24.68■■□□□ 1.54
SMAD4-213ENST00000591914 MSX1P28360 303 aa24.68■■□□□ 1.54
SMAD4-213ENST00000591914 POU6F2P78424 691 aaPredicted RBP24.68■■□□□ 1.54
SMAD4-213ENST00000591914 SLC25A35Q3KQZ1 300 aa24.68■■□□□ 1.54
SMAD4-213ENST00000591914 NAXEQ8NCW5 288 aa24.68■■□□□ 1.54
SMAD4-213ENST00000591914 TRIB1Q96RU8 372 aa24.68■■□□□ 1.54
SMAD4-213ENST00000591914 PTGES2Q9H7Z7 377 aa24.68■■□□□ 1.54
SMAD4-213ENST00000591914 CALHM2Q9HA72 323 aa24.68■■□□□ 1.54
SMAD4-213ENST00000591914 MARCOQ9UEW3 520 aaPredicted RBP24.68■■□□□ 1.54
SMAD4-213ENST00000591914 FAF1Q9UNN5 650 aaPredicted RBP24.68■■□□□ 1.54
SMAD4-213ENST00000591914 RPH3AQ9Y2J0 694 aaPredicted RBP24.68■■□□□ 1.54
SMAD4-213ENST00000591914 KIAA1549Q9HCM3 1950 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 ABCA12Q86UK0 2595 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 MBD3L4A6NDZ8 208 aaPredicted RBP24.67■■□□□ 1.54
SMAD4-213ENST00000591914 MBD3L3A6NE82 208 aaPredicted RBP24.67■■□□□ 1.54
SMAD4-213ENST00000591914 MBD3L5A6NJ08 208 aaPredicted RBP24.67■■□□□ 1.54
SMAD4-213ENST00000591914 TRPC5OSA6NMA1 111 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 SLCO1B7G3V0H7 640 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 KLF11O14901 512 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 SCN2BO60939 215 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 ALDOCP09972 364 aaKnown RBP24.67■■□□□ 1.54
SMAD4-213ENST00000591914 STARP49675 285 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 RCAN2Q14206 197 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 CCNJQ5T5M9 372 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 BHLHB9Q6PI77 547 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 ADGRE4PQ86SQ3 457 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 WDR75Q8IWA0 830 aaKnown RBP24.67■■□□□ 1.54
SMAD4-213ENST00000591914 OR5AK3PQ8NH89 298 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 MBD3L2Q8NHZ7 208 aaPredicted RBP24.67■■□□□ 1.54
SMAD4-213ENST00000591914 C1GALT1C1Q96EU7 318 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 TUBA1CQ9BQE3 449 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 HHATLQ9HCP6 504 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 UBQLN4Q9NRR5 601 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 LRBAP50851 2863 aa24.67■■□□□ 1.54
SMAD4-213ENST00000591914 KITP10721 976 aa24.66■■□□□ 1.54
SMAD4-213ENST00000591914 ZNF708P17019 499 aa24.66■■□□□ 1.54
SMAD4-213ENST00000591914 HK1P19367 917 aa24.66■■□□□ 1.54
SMAD4-213ENST00000591914 TCEA1P23193 301 aaKnown RBP24.66■■□□□ 1.54
SMAD4-213ENST00000591914 EPHA3P29320 983 aa24.66■■□□□ 1.54
SMAD4-213ENST00000591914 SOAT1P35610 550 aa24.66■■□□□ 1.54
SMAD4-213ENST00000591914 CLNS1AP54105 237 aaKnown RBP24.66■■□□□ 1.54
SMAD4-213ENST00000591914 CLDN18P56856 261 aa24.66■■□□□ 1.54
SMAD4-213ENST00000591914 PHC1P78364 1004 aa24.66■■□□□ 1.54
SMAD4-213ENST00000591914 BCL2A1Q16548 175 aa24.66■■□□□ 1.54
SMAD4-213ENST00000591914 DPY19L1Q2PZI1 675 aa24.66■■□□□ 1.54
SMAD4-213ENST00000591914 MEX3BQ6ZN04 569 aaKnown RBP24.66■■□□□ 1.54
SMAD4-213ENST00000591914 SPATA19Q7Z5L4 167 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms