RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 AP3D1O14617 1153 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 TFECO14948 347 aaPredicted RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 PRMT3O60678 531 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 SCN2BO60939 215 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 CPNE3O75131 537 aaKnown RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 SLC43A1O75387 559 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 TSPAN9O75954 239 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 OR2B3O76000 313 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 BEST1O76090 585 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 CCNB2O95067 398 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 RASGRP1O95267 797 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 ZNF682O95780 498 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 RECKO95980 971 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 IL1AP01583 271 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 ESR1P03372 595 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 RAF1P04049 648 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 SCG5P05408 212 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 MMP2P08253 660 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 CYP2A6P11509 494 aaPredicted RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 ANXA8P13928 327 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 PPIBP23284 216 aaKnown RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 CFL1P23528 166 aaKnown RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 CHMP24386 653 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 CFPP27918 469 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 PRDX3P30048 256 aaKnown RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 FMO4P31512 558 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 TNFSF8P32971 234 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 PCGF2P35227 344 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 NNMTP40261 264 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 CD86P42081 329 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 TTPAP49638 278 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 RORCP51449 518 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 BLKP51451 505 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 HK3P52790 923 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 CLDN20P56880 219 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 MAP3K7CLP57077 242 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 C21orf58P58505 322 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 PFN3P60673 137 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 PSMA6P60900 246 aaKnown RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 RRAS2P62070 204 aaPredicted RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 RPP38P78345 283 aaKnown RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 IL1RL1Q01638 556 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 IL10RBQ08334 325 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 SGCGQ13326 291 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 GTF2H2Q13888 395 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 GTF2H3Q13889 308 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 VEZF1Q14119 521 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 GPR19Q15760 415 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 C3AR1Q16581 482 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 TSTQ16762 297 aaKnown RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 VMACQ2NL98 169 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 ALG11Q2TAA5 492 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 HKDC1Q2TB90 917 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 AP5B1Q2VPB7 878 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 GLYR1Q49A26 553 aaPredicted RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 GGTA1PQ4G0N0 100 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 MIDNQ504T8 468 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 HSD17B12Q53GQ0 312 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 SPANXN4Q5MJ08 99 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 TMEM201Q5SNT2 666 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 SLC35F1Q5T1Q4 408 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 ZBTB37Q5TC79 503 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 DDI2Q5TDH0 399 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 MARC1Q5VT66 337 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 FAM69BQ5VUD6 431 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 MEDAGQ5VYS4 303 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 RNLSQ5VYX0 342 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 FAM219BQ5XKK7 198 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 MZT2BQ6NZ67 158 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 GTF2H2CQ6P1K8 395 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 MSANTD2Q6P1R3 559 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 FAM122CQ6P4D5 195 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 FAM199XQ6PEV8 388 aaPredicted RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 PAQR3Q6TCH7 311 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 METAP1DQ6UB28 335 aaPredicted RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 PLET1Q6UQ28 207 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 SHISA2Q6UWI4 295 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 PAMR1Q6UXH9 720 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 MACC1Q6ZN28 852 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 PAQR9Q6ZVX9 377 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 GPRIN1Q7Z2K8 1008 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 GOLGA7Q7Z5G4 137 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 KCTD20Q7Z5Y7 419 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 SLC44A2Q8IWA5 706 aaPredicted RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 LAX1Q8IWV1 398 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 DMRTC2Q8IXT2 367 aaPredicted RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 CYP4Z2PQ8N1L4 340 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 UMODL1-AS1Q8N2C9 162 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 LIX1Q8N485 282 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 C9orf62Q8N4C0 152 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 YIPF7Q8N8F6 280 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 LPCAT1Q8NF37 534 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 OR4M1Q8NGD0 313 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 OR9Q1Q8NGQ5 310 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 OR4L1Q8NH43 312 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 GOT1L1Q8NHS2 421 aaPredicted RBP3.88□□□□□ -1.79
LIG3-211ENST00000588713 LHFPL5Q8TAF8 219 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 BRSK1Q8TDC3 778 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 GPR151Q8TDV0 419 aa3.88□□□□□ -1.79
LIG3-211ENST00000588713 AP3S1Q92572 193 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms