RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 DPY30Q9C005 99 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 CXorf36Q9H7Y0 433 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 FAF1Q9UNN5 650 aaPredicted RBP18.53■□□□□ 0.56
SS18-224ENST00000584083 ADGRG4Q8IZF6 3080 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 CD8B2A6NJW9 211 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 ANGPTL1O95841 491 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 LBPP18428 481 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 HK1P19367 917 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 CHMP24386 653 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 MSX1P28360 303 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 CEACAM8P31997 349 aaPredicted RBP18.52■□□□□ 0.56
SS18-224ENST00000584083 SOAT1P35610 550 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 TIMP3P35625 211 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 POU6F2P78424 691 aaPredicted RBP18.52■□□□□ 0.56
SS18-224ENST00000584083 ZNF295-AS1Q8N0V1 137 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 OR4C3Q8NH37 302 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 PSMA8Q8TAA3 256 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 FAM110BQ8TC76 370 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 TLCD1Q96CP7 247 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 TUBA1CQ9BQE3 449 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 BTBD2Q9BX70 525 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 ACTRT3Q9BYD9 372 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 CALHM2Q9HA72 323 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 NEUROD4Q9HD90 331 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 THAP1Q9NVV9 213 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 ABCA12Q86UK0 2595 aa18.52■□□□□ 0.56
SS18-224ENST00000584083 DVL2O14641 736 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 GMFGO60234 142 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 OXSR1O95747 527 aaPredicted RBP18.51■□□□□ 0.55
SS18-224ENST00000584083 KRT16P08779 473 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 HPGDP15428 266 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 BMP5P22003 454 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 SSTR2P30874 369 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 LHX2P50458 406 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 SLC18A1P54219 525 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 GANABQ14697 944 aaKnown RBP18.51■□□□□ 0.55
SS18-224ENST00000584083 CASP8Q14790 479 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.51■□□□□ 0.55
SS18-224ENST00000584083 CCNJQ5T5M9 372 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 RAET1LQ5VY80 246 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 ATG16L1Q676U5 607 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 OR4F3Q6IEY1 312 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 CDC73Q6P1J9 531 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 APOOLQ6UXV4 268 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 CAMKMTQ7Z624 323 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 ZAR1Q86SH2 424 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 ACBD4Q8NC06 268 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 NAXEQ8NCW5 288 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 SFXN5Q8TD22 340 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 ADAMTS15Q8TE58 950 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 CDS1Q92903 461 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 MOAP1Q96BY2 351 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 STACQ99469 402 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 G6PC3Q9BUM1 346 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 PIGUQ9H490 435 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 MEAF6Q9HAF1 191 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 DUSP22Q9NRW4 184 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 FBXO34Q9NWN3 711 aa18.51■□□□□ 0.55
SS18-224ENST00000584083 NDUFB5O43674 189 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 TBXA2RP21731 343 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 DGKQP52824 942 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 B3GALT5-AS1P59052 145 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 HBA1P69905 142 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 EXOSC6Q5RKV6 272 aaKnown RBP18.5■□□□□ 0.55
SS18-224ENST00000584083 BHLHB9Q6PI77 547 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 CLECL1Q8IZS7 167 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 GATSQ8NAP1 163 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 OR5AK3PQ8NH89 298 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 C1GALT1C1Q96EU7 318 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 HHATLQ9HCP6 504 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 UBQLN4Q9NRR5 601 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 PCDHGB4Q9UN71 923 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 APCP25054 2843 aa18.5■□□□□ 0.55
SS18-224ENST00000584083 MED12LQ86YW9 2145 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 CREBBPQ92793 2442 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 MBD3L4A6NDZ8 208 aaPredicted RBP18.49■□□□□ 0.55
SS18-224ENST00000584083 MBD3L3A6NE82 208 aaPredicted RBP18.49■□□□□ 0.55
SS18-224ENST00000584083 MBD3L5A6NJ08 208 aaPredicted RBP18.49■□□□□ 0.55
SS18-224ENST00000584083 ALG1L2C9J202 215 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 SCDO00767 359 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 NGFRP08138 427 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 KITP10721 976 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 ZNF708P17019 499 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 IGFBP2P18065 325 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 POU3F2P20265 443 aaPredicted RBP18.49■□□□□ 0.55
SS18-224ENST00000584083 ATP6V1C1P21283 382 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 LCN1P31025 176 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 CHMP1BQ7LBR1 199 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 DMRTC2Q8IXT2 367 aaPredicted RBP18.49■□□□□ 0.55
SS18-224ENST00000584083 UBQLNLQ8IYU4 475 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 LRRC34Q8IZ02 419 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 OR5M1Q8NGP8 315 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 MBD3L2Q8NHZ7 208 aaPredicted RBP18.49■□□□□ 0.55
SS18-224ENST00000584083 TREX2Q9BQ50 279 aaPredicted RBP18.49■□□□□ 0.55
SS18-224ENST00000584083 MANSC1Q9H8J5 431 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 GPATCH2Q9NW75 528 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 GIN1Q9NXP7 522 aa18.49■□□□□ 0.55
SS18-224ENST00000584083 ZNF629Q9UEG4 869 aaPredicted RBP18.49■□□□□ 0.55
SS18-224ENST00000584083 MARCOQ9UEW3 520 aaPredicted RBP18.49■□□□□ 0.55
SS18-224ENST00000584083 DCHS2Q6V1P9 2916 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms