RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 UCN2Q96RP3 112 aa13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 PAIP2Q9BPZ3 127 aaKnown RBP13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 TRIM8Q9BZR9 551 aa13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 UCK2Q9BZX2 261 aa13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 PIGUQ9H490 435 aa13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 WDR55Q9H6Y2 383 aaPredicted RBP13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 MANSC1Q9H8J5 431 aa13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 C3orf14Q9HBI5 128 aa13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 NEUROD4Q9HD90 331 aa13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 ZCCHC3Q9NUD5 404 aaKnown RBP13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 ATAD3AQ9NVI7 634 aa13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 AIG1Q9NVV5 245 aa13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 GPR45Q9Y5Y3 372 aa13.42□□□□□ -0.26
RPUSD1-204ENST00000563560 C15orf38-AP3S2A0A0A6YYH1 394 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 MBD3L4A6NDZ8 208 aaPredicted RBP13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 MBD3L3A6NE82 208 aaPredicted RBP13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 MBD3L5A6NJ08 208 aaPredicted RBP13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 HNRNPRO43390 633 aaKnown RBP13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 SCO2O43819 266 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 OXSR1O95747 527 aaPredicted RBP13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 ZNF708P17019 499 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 TBXA2RP21731 343 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 EPHA3P29320 983 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 CCT3P49368 545 aaKnown RBP13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 PRKAG1P54619 331 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 VPS26BQ4G0F5 336 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 SLC9B1Q4ZJI4 515 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 NSUN5P2Q63ZY6 315 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 GALNT10Q86SR1 603 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 OR56A1Q8NGH5 318 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 GOT1L1Q8NHS2 421 aaPredicted RBP13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 MBD3L2Q8NHZ7 208 aaPredicted RBP13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 ZPLD1Q8TCW7 415 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 DUSP19Q8WTR2 217 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 ASB5Q8WWX0 329 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 SLC9A6Q92581 669 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 ZNF75CPQ92670 426 aaPredicted RBP13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 CDS1Q92903 461 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 ABTB1Q969K4 478 aaPredicted RBP13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 MARVELD3Q96A59 401 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 ATP6V1G3Q96LB4 118 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 YIPF4Q9BSR8 244 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 BTBD2Q9BX70 525 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 ACTRT3Q9BYD9 372 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 DSN1Q9H410 356 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 CHST11Q9NPF2 352 aa13.41□□□□□ -0.26
RPUSD1-204ENST00000563560 NKX2-6A6NCS4 301 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 CD8B2A6NJW9 211 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 SASH3O75995 380 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 KCNH1O95259 989 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 DDX5P17844 614 aaKnown RBP13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 CHMP24386 653 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 DPP4P27487 766 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 MSX1P28360 303 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 LCN1P31025 176 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 TIMP3P35625 211 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 KRT20P35900 424 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 PRIM2P49643 509 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 DSCR4P56555 118 aaPredicted RBP13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 UFM1P61960 85 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 CD226Q15762 336 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 LSM12Q3MHD2 195 aaKnown RBP13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 SPANXN4Q5MJ08 99 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 CCNJQ5T5M9 372 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 FIGNL1Q6PIW4 674 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 TRIM42Q8IWZ5 723 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 RELL2Q8NC24 303 aaPredicted RBP13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 TNIP2Q8NFZ5 429 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 MIPOL1Q8TD10 442 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 MOAP1Q96BY2 351 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 ZNF524Q96C55 264 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 C1GALT1C1Q96EU7 318 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 PRPF18Q99633 342 aaKnown RBP13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 NPAS1Q99742 590 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 SPOCK3Q9BQ16 436 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 TUBA1CQ9BQE3 449 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 EXO5Q9H790 373 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 ZNF446Q9NWS9 450 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 TAS2R10Q9NYW0 307 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 COQ3Q9NZJ6 369 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 MED11Q9P086 117 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 CLCF1Q9UBD9 225 aa13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 MARCOQ9UEW3 520 aaPredicted RBP13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 MRTO4Q9UKD2 239 aaKnown RBP13.4□□□□□ -0.26
RPUSD1-204ENST00000563560 PRSS51A0A1B0GVH4 220 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 A0A1W2PQD3 144 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 PRAMEF27A3QJZ7 478 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 HCRTR2O43614 444 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 ANGPTL1O95841 491 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 ALOX5P09917 674 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 PSMA4P25789 261 aaKnown RBP13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 STARP49675 285 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 ZNF136P52737 540 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 PSMD4P55036 377 aaKnown RBP13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 FUT5Q11128 374 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 ATG16L1Q676U5 607 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 IFNEQ86WN2 208 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 LACC1Q8IV20 430 aa13.39□□□□□ -0.27
RPUSD1-204ENST00000563560 PM20D2Q8IYS1 436 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms