RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 RBM4Q9BWF3 364 aaKnown RBP13.2□□□□□ -0.3
CNN2-204ENST00000562075 SPRY4Q9C004 299 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 SEMA4CQ9C0C4 833 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 NRSN2Q9GZP1 204 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 GABARAPL1Q9H0R8 117 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 SMURF2Q9HAU4 748 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 RLIMQ9NVW2 624 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 USE1Q9NZ43 259 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 PDP1Q9P0J1 537 aaPredicted RBP13.2□□□□□ -0.3
CNN2-204ENST00000562075 RHCGQ9UBD6 479 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 KCNE5Q9UJ90 142 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 RAB26Q9ULW5 256 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 CHST2Q9Y4C5 530 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 CCDC88CQ9P219 2028 aa13.2□□□□□ -0.3
CNN2-204ENST00000562075 MUC6Q6W4X9 2439 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 AP3D1O14617 1153 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 TO15178 435 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 FRS3O43559 492 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 REM1O75628 298 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 PRKACGP22612 351 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 IL12BP29460 328 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 RNF144AP50876 292 aaPredicted RBP13.19□□□□□ -0.3
CNN2-204ENST00000562075 NOVA1P51513 510 aaKnown RBP13.19□□□□□ -0.3
CNN2-204ENST00000562075 SMIM11AP58511 58 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 RNF4P78317 190 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 PSPHP78330 225 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 PLCXD2Q0VAA5 305 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 NPTX1Q15818 432 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 ZNF141Q15928 474 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 EXOC3L2Q2M3D2 409 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 COLEC12Q5KU26 742 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 C6orf52Q5T4I8 152 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 PRR22Q8IZ63 422 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 SLC34A3Q8N130 599 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 ZNF441Q8N8Z8 693 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 APCDD1LQ8NCL9 501 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 OR4C15Q8NGM1 316 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 PHF10Q8WUB8 498 aaKnown RBP13.19□□□□□ -0.3
CNN2-204ENST00000562075 NR4A3Q92570 626 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 HSPBAP1Q96EW2 488 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 NAF1Q96HR8 494 aaKnown RBP13.19□□□□□ -0.3
CNN2-204ENST00000562075 PRRC1Q96M27 445 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 BARD1Q99728 777 aaKnown RBP13.19□□□□□ -0.3
CNN2-204ENST00000562075 FNDC11Q9BVV2 318 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 OSBPL11Q9BXB4 747 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 OSBPL10Q9BXB5 764 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 B3GNT4Q9C0J1 378 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 HOXD1Q9GZZ0 328 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 ZNF700Q9H0M5 742 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 EVA1AQ9H8M9 152 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.19□□□□□ -0.3
CNN2-204ENST00000562075 ACER3Q9NUN7 267 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 SMPD3Q9NY59 655 aaPredicted RBP13.19□□□□□ -0.3
CNN2-204ENST00000562075 KIF17Q9P2E2 1029 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 ZNF223Q9UK11 482 aaPredicted RBP13.19□□□□□ -0.3
CNN2-204ENST00000562075 KCND3Q9UK17 655 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 LRCH1Q9Y2L9 728 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 ORC6Q9Y5N6 252 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 AP4B1Q9Y6B7 739 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 PCNX2A6NKB5 2137 aa13.19□□□□□ -0.3
CNN2-204ENST00000562075 MYO15AQ9UKN7 3530 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 DMDP11532 3685 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 CDC14CA4D256 554 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 CDHR4A6H8M9 788 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 NPIPB9F8W1W9 429 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 FFAR1O14842 300 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 HS6ST1O60243 411 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 UTS2O95399 124 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 ALPLP05186 524 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 H1F0P07305 194 aaKnown RBP13.18□□□□□ -0.3
CNN2-204ENST00000562075 CEACAM1P13688 526 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 LCN1P31025 176 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 IFNA8P32881 189 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 TAS2R41P59536 307 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 RPS15P62841 145 aaKnown RBP13.18□□□□□ -0.3
CNN2-204ENST00000562075 PPP2R2BQ00005 443 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 FOXD4Q12950 439 aaPredicted RBP13.18□□□□□ -0.3
CNN2-204ENST00000562075 PCOLCEQ15113 449 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 ZSWIM7Q19AV6 140 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 FGD3Q5JSP0 725 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 PLEKHM3Q6ZWE6 761 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 RANBP3LQ86VV4 465 aaPredicted RBP13.18□□□□□ -0.3
CNN2-204ENST00000562075 NLGN4XQ8N0W4 816 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 ZNF527Q8NB42 609 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 PIK3C3Q8NEB9 887 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 NLGN4YQ8NFZ3 816 aaPredicted RBP13.18□□□□□ -0.3
CNN2-204ENST00000562075 OR5L2Q8NGL0 311 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 DIO2Q92813 273 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 TP53INP1Q96A56 240 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 OMA1Q96E52 524 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 DHRS1Q96LJ7 313 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 ZNF570Q96NI8 536 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 MCHR1Q99705 422 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 NMNAT1Q9HAN9 279 aaPredicted RBP13.18□□□□□ -0.3
CNN2-204ENST00000562075 ACAD8Q9UKU7 415 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 TCFL5Q9UL49 500 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 TMCC3Q9ULS5 477 aa13.18□□□□□ -0.3
CNN2-204ENST00000562075 A4GNTQ9UNA3 340 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms