RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ZNF184Q99676 751 aaPredicted RBP9.52□□□□□ -0.89
USP3-219ENST00000561326 PIP5K1AQ99755 562 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 CIB1Q99828 191 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 WDR77Q9BQA1 342 aaPredicted RBP9.52□□□□□ -0.89
USP3-219ENST00000561326 AMBRA1Q9C0C7 1298 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 NRSN2Q9GZP1 204 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 QRSL1Q9H0R6 528 aaKnown RBP9.52□□□□□ -0.89
USP3-219ENST00000561326 COQ10BQ9H8M1 238 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 FBXO34Q9NWN3 711 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 OAZ3Q9UMX2 235 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 ABCG2Q9UNQ0 655 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 SAMHD1Q9Y3Z3 626 aaKnown RBP9.52□□□□□ -0.89
USP3-219ENST00000561326 HS3ST3B1Q9Y662 390 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 TNFRSF11BO00300 401 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 PEX12O00623 359 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 SCDO00767 359 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 AP3D1O14617 1153 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 ABCB7O75027 752 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 UGT2B17O75795 530 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 ZIC2O95409 532 aaPredicted RBP9.51□□□□□ -0.89
USP3-219ENST00000561326 NAGAP17050 411 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 TNFRSF1BP20333 461 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 FPR1P21462 350 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 OTX2P32243 289 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 DCTP40126 519 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 TMED10P49755 219 aaKnown RBP9.51□□□□□ -0.89
USP3-219ENST00000561326 CLK3P49761 638 aaKnown RBP9.51□□□□□ -0.89
USP3-219ENST00000561326 RGS8P57771 180 aaPredicted RBP9.51□□□□□ -0.89
USP3-219ENST00000561326 EEF1A1P68104 462 aaKnown RBP9.51□□□□□ -0.89
USP3-219ENST00000561326 EFR3AQ14156 821 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 PCOLCEQ15113 449 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 NRF1Q16656 503 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 RNF220Q5VTB9 566 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 SHQ1Q6PI26 577 aaKnown RBP9.51□□□□□ -0.89
USP3-219ENST00000561326 KIRREL2Q6UWL6 708 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 IZUMO2Q6UXV1 221 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 DEF8Q6ZN54 512 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 STK32CQ86UX6 486 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 RANBP3LQ86VV4 465 aaPredicted RBP9.51□□□□□ -0.89
USP3-219ENST00000561326 GRAMD2AQ8IUY3 354 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 KBTBD2Q8IY47 623 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 ZNF440Q8IYI8 595 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 GALNT4Q8N4A0 578 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 CBR4Q8N4T8 237 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 SLC15A4Q8N697 577 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 ZNF614Q8N883 585 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 PIK3C3Q8NEB9 887 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 OR11G2Q8NGC1 345 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 APOBEC4Q8WW27 367 aaKnown RBP9.51□□□□□ -0.89
USP3-219ENST00000561326 DNAJC9Q8WXX5 260 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 SLC35B4Q969S0 331 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 IMMP1LQ96LU5 166 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 EPYCQ99645 322 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 ARHGDIGQ99819 225 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 FNDC11Q9BVV2 318 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 NTN4Q9HB63 628 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 MMP25Q9NPA2 562 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 DLL3Q9NYJ7 618 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 TMCC3Q9ULS5 477 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 SLC35A3Q9Y2D2 325 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 LRRC42Q9Y546 428 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 PCDHGA6Q9Y5G7 932 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 ORC6Q9Y5N6 252 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 NPFFR2Q9Y5X5 522 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 PCNX3Q9H6A9 2034 aa9.51□□□□□ -0.89
USP3-219ENST00000561326 A0A1W2PQ72 361 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 CDHR4A6H8M9 788 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 CDRT15L2A8MXV6 281 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 NPIPB9F8W1W9 429 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 GTPBP1O00178 669 aaKnown RBP9.5□□□□□ -0.89
USP3-219ENST00000561326 SOCS6O14544 535 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 DIRAS1O95057 198 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 GADD45GO95257 159 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 RASAL1O95294 804 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 UTS2O95399 124 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 HPP00738 406 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 IGKV1D-16P01601 117 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 COX6A1P12074 109 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 ACADSP16219 412 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 ZNF26P17031 533 aaPredicted RBP9.5□□□□□ -0.89
USP3-219ENST00000561326 TBXA2RP21731 343 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 ABCD3P28288 659 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 RRM2P31350 389 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 ADH7P40394 386 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 YAP1P46937 504 aaKnown RBP9.5□□□□□ -0.89
USP3-219ENST00000561326 HMGA2P52926 109 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 CDH12P55289 794 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 TAS2R41P59536 307 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 SPIBQ01892 262 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 PLCXD2Q0VAA5 305 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 RSPO4Q2I0M5 234 aaPredicted RBP9.5□□□□□ -0.89
USP3-219ENST00000561326 IQCCQ4KMZ1 466 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 KLHL26Q53HC5 615 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 COLEC12Q5KU26 742 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 OTUD3Q5T2D3 398 aaPredicted RBP9.5□□□□□ -0.89
USP3-219ENST00000561326 PDZK1Q5T2W1 519 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 TCTN3Q6NUS6 607 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 ZNF836Q6ZNA1 936 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 ZNF550Q7Z398 422 aa9.5□□□□□ -0.89
USP3-219ENST00000561326 HMGN2P46Q86SG4 172 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms