RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 MT-ND1P03886 318 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 COX6A1P12074 109 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF23P17027 643 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF26P17031 533 aaPredicted RBP7.95□□□□□ -1.14
TRAF3-209ENST00000560463 NAGAP17050 411 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ENDOUP21128 410 aaKnown RBP7.95□□□□□ -1.14
TRAF3-209ENST00000560463 IL12BP29460 328 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 DNAJA1P31689 397 aaKnown RBP7.95□□□□□ -1.14
TRAF3-209ENST00000560463 IFNA8P32881 189 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 DLSTP36957 453 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 DCTP40126 519 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ADH7P40394 386 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 OR1E2P47887 323 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 HSPA13P48723 471 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 NR0B1P51843 470 aaKnown RBP7.95□□□□□ -1.14
TRAF3-209ENST00000560463 HMGA2P52926 109 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 FOXL2P58012 376 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 SMIM11AP58511 58 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 EEF1A1P68104 462 aaKnown RBP7.95□□□□□ -1.14
TRAF3-209ENST00000560463 LRRC36Q1X8D7 754 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 CCNJQ5T5M9 372 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 PLAG1Q6DJT9 500 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF836Q6ZNA1 936 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ZBTB49Q6ZSB9 765 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 OLIG3Q7RTU3 272 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF605Q86T29 641 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 VRK2Q86Y07 508 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 SLC15A4Q8N697 577 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ZSCAN1Q8NBB4 408 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 OR11G2Q8NGC1 345 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 OR4N2Q8NGD1 307 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ELP5Q8TE02 316 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 DIO2Q92813 273 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 C8orf44Q96CB5 159 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ZG16BQ96DA0 208 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 IMMP1LQ96LU5 166 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 IP6K3Q96PC2 410 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF184Q99676 751 aaPredicted RBP7.95□□□□□ -1.14
TRAF3-209ENST00000560463 CIB1Q99828 191 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 RSPO3Q9BXY4 272 aaPredicted RBP7.95□□□□□ -1.14
TRAF3-209ENST00000560463 NRSN2Q9GZP1 204 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 QRSL1Q9H0R6 528 aaKnown RBP7.95□□□□□ -1.14
TRAF3-209ENST00000560463 NTN4Q9HB63 628 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 MMP25Q9NPA2 562 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 UBQLN4Q9NRR5 601 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 DLL3Q9NYJ7 618 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF223Q9UK11 482 aaPredicted RBP7.95□□□□□ -1.14
TRAF3-209ENST00000560463 PRDM4Q9UKN5 801 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ACAD8Q9UKU7 415 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 OAZ3Q9UMX2 235 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ABCG2Q9UNQ0 655 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 SLC35A3Q9Y2D2 325 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 LRRC42Q9Y546 428 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 PCSK5Q92824 1860 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 NCKAP5O14513 1909 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 NSG1A0A0A6YYJ2 146 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 TRBV11-1A0A0K0K1C0 115 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 A0A1W2PQD3 144 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 CDHR4A6H8M9 788 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 PRAMEF25A6NGN4 478 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 OR6C70A6NIJ9 312 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 HS6ST1O60243 411 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 TSPAN2O60636 221 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 FMO6PO60774 539 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 REM1O75628 298 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 GADD45GO95257 159 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 RASAL1O95294 804 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 EPPINO95925 133 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 HPRP00739 348 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 IGKV1D-16P01601 117 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 NGFRP08138 427 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 FPR1P21462 350 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 TBXA2RP21731 343 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 RRM2P31350 389 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 RFX3P48380 749 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 TMED10P49755 219 aaKnown RBP7.94□□□□□ -1.14
TRAF3-209ENST00000560463 ALDH3A2P51648 485 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 RGS8P57771 180 aaPredicted RBP7.94□□□□□ -1.14
TRAF3-209ENST00000560463 PLCXD2Q0VAA5 305 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 EFR3AQ14156 821 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 FGFBP1Q14512 234 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 MAPK14Q16539 360 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 BTBD16Q32M84 506 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 TCTN3Q6NUS6 607 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 SHQ1Q6PI26 577 aaKnown RBP7.94□□□□□ -1.14
TRAF3-209ENST00000560463 KIRREL2Q6UWL6 708 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 IZUMO2Q6UXV1 221 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 TSEN54Q7Z6J9 526 aaKnown RBP7.94□□□□□ -1.14
TRAF3-209ENST00000560463 RANBP3LQ86VV4 465 aaPredicted RBP7.94□□□□□ -1.14
TRAF3-209ENST00000560463 DTX1Q86Y01 620 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 RAB43Q86YS6 212 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF440Q8IYI8 595 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 LINC00471Q8N535 108 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 IL22RA1Q8N6P7 574 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 PIK3C3Q8NEB9 887 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 SLC22A8Q8TCC7 542 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 PRRC1Q96M27 445 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 RDH12Q96NR8 316 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 PIP5K1AQ99755 562 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 RBM4BQ9BQ04 359 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms