RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TRIM36Q9NQ86 728 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 CALML5Q9NZT1 146 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 TCF20Q9UGU0 1960 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 TEX13CA0A0J9YWL9 993 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 J3QRE1 110 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 HRO43593 1189 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 CLEC3AO75596 197 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 C6P13671 934 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 LAG3P18627 525 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 NDUFV2P19404 249 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 SHC1P29353 583 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 TRHRP34981 398 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 THBS2P35442 1172 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 CCR2P41597 374 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 RGS8P57771 180 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 RAB8AP61006 207 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 SP3Q02447 781 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 TGM3Q08188 693 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 IKZF1Q13422 519 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 SFXN4Q6P4A7 337 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 ADCK2Q7Z695 626 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 TPRA1Q86W33 373 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 OR7D2Q96RA2 312 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 SLC38A1Q9H2H9 487 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 SLCO1C1Q9NYB5 712 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 NLGN3Q9NZ94 848 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 SIRT4Q9Y6E7 314 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 KCNE3Q9Y6H6 103 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 PDE4DIPQ5VU43 2346 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 CARNS1A5YM72 827 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 RFXAPO00287 272 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 PPM1DO15297 605 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 KLF4O43474 513 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 PQBP1O60828 265 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 PRKRAO75569 313 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 SOX30O94993 753 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 PRNPP04156 253 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 TCRBP04435 133 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 PEPDP12955 493 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 GCGRP47871 477 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 ST8SIA6P61647 398 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 PRR5P85299 388 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 DPTQ07507 201 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 SLC9A5Q14940 896 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 TRAM1Q15629 374 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 KLHL12Q53G59 568 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 HSD17B12Q53GQ0 312 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 MBOAT2Q6ZWT7 520 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 CCDC116Q8IYX3 515 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 SAMD8Q96LT4 415 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 COPZ2Q9P299 210 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 IL20RAQ9UHF4 553 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 ENTPD4Q9Y227 616 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 A0A1B0GVC2 190 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 A6NIN4 97 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 FAM183AA6NL82 134 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 CCL16O15467 120 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 LCMT2O60294 686 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 LILRB3O75022 631 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 CD53P19397 219 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 METAP1P53582 386 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 C9orf64Q5T6V5 341 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 ZNF793Q6ZN11 406 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 TOMM5Q8N4H5 51 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 OR5W2Q8NH69 310 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 TRMT10AQ8TBZ6 339 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 NACC2Q96BF6 587 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 SLC41A3Q96GZ6 507 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 ABHD1Q96SE0 405 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 MCHR1Q99705 422 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 HMX1Q9NP08 348 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 KRCC1Q9NPI7 259 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 PCYT1BQ9Y5K3 369 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 STON1Q9Y6Q2 735 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 RNF215Q9Y6U7 377 aa11.04□□□□□ -0.64
VIPAS39-211ENST00000557658 HTTP42858 3142 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 A0A1B0GVI7 797 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 A0A1W2PPV9 198 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 DAPL1A0PJW8 107 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 LRIT2A6NDA9 550 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 EMC8O43402 210 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 PIP5K1CO60331 668 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 FZD7O75084 574 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 OR5F1O95221 314 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 PRKAR1BP31321 381 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 SRP9P49458 86 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 CSNK1G2P78368 415 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 HSF2Q03933 536 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 SLC36A2Q495M3 483 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 TMEM35AQ53FP2 167 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 PLBD1Q6P4A8 553 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 ARL9Q6T311 187 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 LYPD4Q6UWN0 246 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 MEPCEQ7L2J0 689 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 GET4Q7L5D6 327 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 C16orf62Q7Z3J2 963 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 GDF7Q7Z4P5 450 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 TOR1AIP2Q8NFQ8 470 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 OR11H4Q8NGC9 324 aa11.03□□□□□ -0.64
VIPAS39-211ENST00000557658 HGDQ93099 445 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms