RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 AICDAQ9GZX7 198 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ATG10Q9H0Y0 220 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ABCG4Q9H172 646 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 CCDC68Q9H2F9 335 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 LRRN3Q9H3W5 708 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 TFB2MQ9H5Q4 396 aaKnown RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ALG9Q9H6U8 611 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ROPN1Q9HAT0 212 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SYTL2Q9HCH5 934 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 FAM60AQ9NP50 221 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 UTP6Q9NYH9 597 aaKnown RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 STOX2Q9P2F5 926 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 CPSF2Q9P2I0 782 aaKnown RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 TXNDC16Q9P2K2 825 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ZNF225Q9UK10 706 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 KLHL20Q9Y2M5 609 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 TDRKHQ9Y2W6 561 aaKnown RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 OARD1Q9Y530 152 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 CPAMD8Q8IZJ3 1885 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 AHCTF1Q8WYP5 2266 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 IGF2RP11717 2491 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 PCNX3Q9H6A9 2034 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 FBN1P35555 2871 aaKnown RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 A0A0G2JPF8 293 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 IGHV5-10-1A0A0J9YXX1 117 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 A0A1W2PS18 150 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CCDC189A1A4V9 331 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 FAM149AA5PLN7 773 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 OR5K3A6NET4 321 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 OR5K4A6NMS3 321 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 A8MT66 165 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 A8MU76 341 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 HNRNPCL3B7ZW38 293 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 C4orf51C9J302 202 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 D6RAR5 112 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 E7EQ34 232 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ZNF587BE7ETH6 402 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 E2F3O00716 465 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 COPEO14579 308 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 OR7A17O14581 309 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 HAT1O14929 419 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PFDN6O15212 129 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 P2RX6O15547 441 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TNFSF14O43557 240 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 LCMT2O60294 686 aaKnown RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ZIC3O60481 467 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PLIN3O60664 434 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 HNRNPCL1O60812 293 aaKnown RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CTSVO60911 334 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 GLRA3O75311 464 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ERLIN1O75477 346 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 SLC22A3O75751 556 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TBX6O95947 436 aaPredicted RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 LDLRP01130 860 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 RPLP0P05388 317 aaKnown RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PROS1P07225 676 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 GP1BAP07359 652 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 C8GP07360 202 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TUBBP07437 444 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 HNRNPCL4P0DMR1 293 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 THRAP10827 490 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PCNAP12004 261 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CEACAM1P13688 526 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 UGT2B7P16662 529 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 VCLP18206 1134 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TSPAN8P19075 237 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ITIH1P19827 911 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CD22P20273 847 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CYP2A7P20853 494 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 MAGP20916 626 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CSRP1P21291 193 aaKnown RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CNTFP26441 200 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CRABP2P29373 138 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PRDX3P30048 256 aaKnown RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 HNRNPH1P31943 449 aaKnown RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 RPA3P35244 121 aaPredicted RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 GGT5P36269 586 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PIGAP37287 484 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 SLC26A3P40879 764 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 HALP42357 657 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 MAPK9P45984 424 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 RGS4P49798 205 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 RAB28P51157 221 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 NOVA1P51513 510 aaKnown RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 RIPPLY3P57055 190 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 MAGOHP61326 146 aaKnown RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ATP6V0D1P61421 351 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CDKL1Q00532 357 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PLOD1Q02809 727 aaPredicted RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ZFP36L1Q07352 338 aaKnown RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 IFFO1Q0D2I5 559 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 NAE1Q13564 534 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 C16orf72Q14CZ0 275 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 EFNB3Q15768 340 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TIGD6Q17RP2 521 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 DEFB110Q30KQ9 67 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TTLL9Q3SXZ7 439 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 SOWAHCQ53LP3 525 aaPredicted RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ESCO2Q56NI9 601 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 N4BP2L1Q5TBK1 243 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms