RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CDC40O60508 579 aaKnown RBP eCLIP10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 IGLV3-27P01718 113 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 SPARCP09486 303 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 HOXC12P31275 282 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 MC3RP41968 323 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF91Q05481 1191 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 RIT1Q92963 219 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 MR1Q95460 341 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 MSLNLQ96KJ4 702 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 FYTTD1Q96QD9 318 aaKnown RBP10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 C11orf54Q9H0W9 315 aaPredicted RBP10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 BRF2Q9HAW0 419 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 ENAMQ9NRM1 1142 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 STARD5Q9NSY2 213 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF226Q9NYT6 803 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 ATXN7L1Q9ULK2 861 aaPredicted RBP10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 FLRT2O43155 660 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 SEMA3DO95025 777 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 HMGN2P05204 90 aaKnown RBP10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 VAMP1P23763 118 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF33BQ06732 778 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 NSDHLQ15738 373 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 TATDN3Q17R31 274 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 SLC5A12Q1EHB4 618 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 TMEM31Q5JXX7 168 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 IL17RDQ8NFM7 739 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 CEP76Q8TAP6 659 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 TMEM121BQ9BXQ6 578 aaPredicted RBP10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 SLC6A16Q9GZN6 736 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 CNIH4Q9P003 139 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 C5orf51A6NDU8 294 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 CD8B2A6NJW9 211 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 HOXC11O43248 304 aaPredicted RBP10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 SSX4O60224 188 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 CSO75390 466 aaKnown RBP10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 CD8BP10966 210 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 NDUFV2P19404 249 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 HNRNPA2B1P22626 353 aaKnown RBP10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 STOMP27105 288 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 MAP4K2Q12851 820 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 GPR19Q15760 415 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 SWI5Q1ZZU3 235 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF782Q6ZMW2 699 aaPredicted RBP10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 SLC44A3Q8N4M1 653 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 PHOSPHO2Q8TCD6 241 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 DNAJA4Q8WW22 397 aaPredicted RBP10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 APOOQ9BUR5 198 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 PTGES2Q9H7Z7 377 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 MCCC2Q9HCC0 563 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 DMRT3Q9NQL9 472 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 C14orf105Q9NVL8 296 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 WDR90Q96KV7 1748 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 OTOFQ9HC10 1997 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 TRBV4-1A0A0J9YWV2 114 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 A0A0X1KG70 313 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 ITGA5P08648 1049 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF41P51814 821 aaPredicted RBP10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 WNT4P56705 351 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 CDK3Q00526 305 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 PLCXD2Q0VAA5 305 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 C6orf132Q5T0Z8 1188 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 CEACAM19Q7Z692 300 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 ACBD7Q8N6N7 88 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 CYB561A3Q8NBI2 242 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 RPLP0P6Q8NHW5 317 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 G6PC3Q9BUM1 346 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 KCMF1Q9P0J7 381 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 MBD2Q9UBB5 411 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 CA5BQ9Y2D0 317 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 ANK1P16157 1881 aa10.2□□□□□ -0.78
PCDHGA1-202ENST00000517417 UNC119BA6NIH7 251 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 CLEC2LP0C7M8 214 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 ATF4P18848 351 aaPredicted RBP10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 UQCRC1P31930 480 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 PTGS2P35354 604 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 P2RY2P41231 377 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 CAV3P56539 151 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 RPA4Q13156 261 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 ALG10BQ5I7T1 473 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 FBXO42Q6P3S6 717 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 DPPA4Q7L190 304 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 BCDIN3DQ7Z5W3 292 aaKnown RBP10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 OR9A2Q8NGT5 310 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 OR4K13Q8NH42 304 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 OR56A3Q8NH54 315 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 WFDC5Q8TCV5 224 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 HCAR2Q8TDS4 363 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 APH1BQ8WW43 257 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 FAM3CQ92520 227 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 SLC7A6Q92536 515 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZFYVE21Q9BQ24 234 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 NANSQ9NR45 359 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 UPB1Q9UBR1 384 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 APC2O95996 2303 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 TNFRSF10AO00220 468 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 TSPAN4O14817 238 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 DSCR3O14972 297 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 PVRP15151 417 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 PLGLB1Q02325 96 aa10.19□□□□□ -0.78
PCDHGA1-202ENST00000517417 MLLT11Q13015 90 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms