RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 XKR7Q5GH72 579 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 EXOSC6Q5RKV6 272 aaKnown RBP9.85□□□□□ -0.83
RNF4-212ENST00000509258 OR2A2Q6IF42 318 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 RNF165Q6ZSG1 346 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 IKBIPQ70UQ0 350 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 GRAMD2AQ8IUY3 354 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 OR6Y1Q8NGX8 325 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 TCP10LQ8TDR4 215 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 TWIST2Q8WVJ9 160 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 SMPDL3BQ92485 455 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 INTS12Q96CB8 462 aaKnown RBP9.85□□□□□ -0.83
RNF4-212ENST00000509258 C16orf58Q96GQ5 468 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 SFXN2Q96NB2 322 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 UCN2Q96RP3 112 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 CCT7Q99832 543 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 STMN4Q9H169 189 aaPredicted RBP9.85□□□□□ -0.83
RNF4-212ENST00000509258 REEP4Q9H6H4 257 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 SDHAF3Q9NRP4 125 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 SIRT3Q9NTG7 399 aaPredicted RBP9.85□□□□□ -0.83
RNF4-212ENST00000509258 DDX18Q9NVP1 670 aaKnown RBP9.85□□□□□ -0.83
RNF4-212ENST00000509258 GALNT8Q9NY28 637 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 DKKL1Q9UK85 242 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 OR10H1Q9Y4A9 318 aa9.85□□□□□ -0.83
RNF4-212ENST00000509258 ARID1AO14497 2285 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 SH3D21A4FU49 640 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 FAM171A2A8MVW0 826 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 H3BQF6 201 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 ARHGEF9O43307 516 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 RGS14O43566 566 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 HCRTR2O43614 444 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 COQ9O75208 318 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 LYPLA1O75608 230 aaPredicted RBP9.84□□□□□ -0.83
RNF4-212ENST00000509258 TNFSF13O75888 250 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 UTS2O95399 124 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 CRHP06850 196 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 INHBBP09529 407 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 CD53P19397 219 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 ETV4P43268 484 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 RFX3P48380 749 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 RNF144AP50876 292 aaPredicted RBP9.84□□□□□ -0.83
RNF4-212ENST00000509258 CLDN20P56880 219 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 CYP27C1Q4G0S4 372 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 SHEQ5VZ18 495 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 LUZP2Q86TE4 346 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 SLC16A11Q8NCK7 471 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 OR7A2PQ8NGA2 310 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 OR4K17Q8NGC6 315 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 DUSP19Q8WTR2 217 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 PKNOX2Q96KN3 472 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 C1orf50Q9BV19 199 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 PPCSQ9HAB8 311 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 PPP4R1LQ9P1A2 415 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 ZDHHC2Q9UIJ5 367 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 MRTO4Q9UKD2 239 aaKnown RBP9.84□□□□□ -0.83
RNF4-212ENST00000509258 PACSIN3Q9UKS6 424 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 MRPS18CQ9Y3D5 142 aaKnown RBP9.84□□□□□ -0.83
RNF4-212ENST00000509258 TRAF6Q9Y4K3 522 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 JMJD1CQ15652 2540 aa9.84□□□□□ -0.83
RNF4-212ENST00000509258 DSCAMO60469 2012 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 UQCRHLA0A096LP55 91 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 OR2M5A3KFT3 312 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 LINC01387J3KSC0 135 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 MSTNO14793 375 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 OIP5O43482 229 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 ITM2AO43736 263 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 TYROBPO43914 113 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 NPHS1O60500 1241 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 TBX19O60806 448 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 SLITRK5O94991 958 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 NKX2-2O95096 273 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 FGF4P08620 206 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 LAMP1P11279 417 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 PEPDP12955 493 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 HK1P19367 917 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 CLK3P49761 638 aaKnown RBP9.83□□□□□ -0.84
RNF4-212ENST00000509258 PRKAG1P54619 331 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 PSMD4P55036 377 aaKnown RBP9.83□□□□□ -0.84
RNF4-212ENST00000509258 NAA20P61599 178 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 NKX6-1P78426 367 aaPredicted RBP9.83□□□□□ -0.84
RNF4-212ENST00000509258 FGFBP1Q14512 234 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 PTGR1Q14914 329 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 POU4F3Q15319 338 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 BCL2A1Q16548 175 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 DUSP5Q16690 384 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 TMEM44Q2T9K0 475 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 CCNJQ5T5M9 372 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 VWA1Q6PCB0 445 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 FIGNL1Q6PIW4 674 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 KRTAP1-3Q8IUG1 177 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 DDIASQ8IXT1 998 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 UBQLNLQ8IYU4 475 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 MEIOBQ8N635 442 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 KRTCAP2Q8N6L1 136 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 GATSQ8NAP1 163 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 NUP43Q8NFH3 380 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 OR4C3Q8NH37 302 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 FIG4Q92562 907 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 ZNF524Q96C55 264 aa9.83□□□□□ -0.84
RNF4-212ENST00000509258 PPCDCQ96CD2 204 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms