RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 LHCGRP22888 699 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 WARSP23381 471 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 IGFBP5P24593 272 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 PSMA1P25786 263 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 MAPK3P27361 379 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CALCRP30988 508 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 HOXC13P31276 330 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SDC4P31431 198 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 TNFSF8P32971 234 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SHMT2P34897 504 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 TGFBR2P37173 567 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 MMP12P39900 470 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 EIF2S3P41091 472 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 MAGEA2P43356 314 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 RFX2P48378 723 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 HSPA7P48741 367 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 ACOT2P49753 483 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 GSK3BP49841 420 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CLCN3P51790 818 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SPCS3P61009 180 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 UBE2IP63279 158 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CCNA1P78396 465 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 DEFA6Q01524 100 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC25A11Q02978 314 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 LIPEQ05469 1076 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 PLD1Q13393 1074 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CUL2Q13617 745 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 TNFAIP1Q13829 316 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 C1DQ13901 141 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 DGCR6Q14129 220 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 TSNQ15631 228 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 MEP1AQ16819 746 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 PPP1R3AQ16821 1122 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 MICBQ29980 383 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM83EQ2M2I3 478 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 WSCD2Q2TBF2 565 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 GFOD2Q3B7J2 385 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 Q5BKY6 102 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF628Q5EBL2 1059 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 TCTE1Q5JU00 501 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 PDSS1Q5T2R2 415 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 GPRC6AQ5T6X5 926 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 NXNL2Q5VZ03 156 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 KDM4DQ6B0I6 523 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM198BQ6UWH4 519 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM131AQ6UXB0 335 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM92BQ6ZTR7 304 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 GPR142Q7Z601 462 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SNX20Q7Z614 316 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SNX29P2Q8IUI4 249 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SVBPQ8N300 66 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 UXS1Q8NBZ7 420 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 RDM1Q8NG50 284 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 OR4M2Q8NGB6 313 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 OR4F6Q8NGB9 312 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 OR4A15Q8NGL6 344 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 OR2T11Q8NH01 316 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 MAPK15Q8TD08 544 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 HEXDCQ8WVB3 486 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 NUDCD2Q8WVJ2 157 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 ADAMTS14Q8WXS8 1223 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 NSMAFQ92636 917 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CENPIQ92674 756 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 KAT2AQ92830 837 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 TCEAL4Q96EI5 215 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 PGAP3Q96FM1 320 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SIPA1Q96FS4 1042 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 PDLIM5Q96HC4 596 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CDKN2AIPNLQ96HQ2 116 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM84BQ96KN1 310 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 KLHL15Q96M94 604 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 TMEM68Q96MH6 324 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 QRFPRQ96P65 431 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 MCEEQ96PE7 176 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 COPS4Q9BT78 406 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SRRQ9GZT4 340 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 TWSG1Q9GZX9 223 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 RHOJQ9H4E5 214 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 ZBTB20Q9HC78 741 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 ANKEF1Q9NU02 776 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 IMPAD1Q9NX62 359 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 BABAM2Q9NXR7 383 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 OBP2AQ9NY56 170 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 RBAKQ9NYW8 714 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 GTSE1Q9NYZ3 720 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CNOT2Q9NZN8 540 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 STOX2Q9P2F5 926 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 RCOR3Q9P2K3 495 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 POLG2Q9UHN1 485 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 GJD2Q9UKL4 321 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SNX6Q9UNH7 406 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 NCKAP1Q9Y2A7 1128 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 MGAMO43451 1857 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 REV3LO60673 3130 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 IRGMA1A4Y4 181 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 C7orf66A4D0T2 115 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 TRABD2BA6NFA1 517 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 FABP12A6NFH5 140 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC9B1P1A6NJY1 282 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ASB14A6NK59 587 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms