RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 S1PR1P21453 382 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 ACHEP22303 614 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 GPX3P22352 226 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 GRK2P25098 689 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 PSMA4P25789 261 aaKnown RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 SHC1P29353 583 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 PTPN7P35236 360 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 ATP5OP48047 213 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 ATP4BP51164 291 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 DSCR4P56555 118 aaPredicted RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 TMEM33P57088 247 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 COPS2P61201 443 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 RPS3AP61247 264 aaKnown RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 RPP38P78345 283 aaKnown RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 POU3F1Q03052 451 aaPredicted RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 CHRNEQ04844 493 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 DUSP2Q05923 314 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 EGR3Q06889 387 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 PRPSAP1Q14558 356 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF267Q14586 743 aaPredicted RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 POU6F1Q14863 301 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 HERPUD1Q15011 391 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 TCEAL1Q15170 157 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 ADRM1Q16186 407 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 ASTE1Q2TB18 679 aaPredicted RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 ARMCX4Q5H9R4 360 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 AARS2Q5JTZ9 985 aaKnown RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 RAET1LQ5VY80 246 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF470Q6ECI4 717 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 KLHL17Q6TDP4 642 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 Q6YL49 198 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 NUP54Q7Z3B4 507 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 VN1R5Q7Z5H4 357 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 UBE3DQ7Z6J8 389 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 KLHDC8AQ8IYD2 350 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 CDK20Q8IZL9 346 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 CCDC89Q8N998 374 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 BBOF1Q8ND07 529 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 TRIM58Q8NG06 486 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 OR52B6Q8NGF0 335 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 MAIP1Q8WWC4 291 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF75CPQ92670 426 aaPredicted RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 NEIL2Q969S2 332 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 DACT3Q96B18 629 aaPredicted RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 FAM136AQ96C01 138 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 OMA1Q96E52 524 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 MUS81Q96NY9 551 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 PANX3Q96QZ0 392 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 VAT1Q99536 393 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 MAPKAP1Q9BPZ7 522 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 TBL1YQ9BQ87 522 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 TSSK1BQ9BXA7 367 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 SRXN1Q9BYN0 137 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 TRIM54Q9BYV2 358 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 OSBPL8Q9BZF1 889 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 PCBD2Q9H0N5 130 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 TPK1Q9H3S4 243 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 GOLPH3Q9H4A6 298 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 C10orf88Q9H8K7 445 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 FKRPQ9H9S5 495 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 GRPEL1Q9HAV7 217 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 PALMDQ9NP74 551 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 PRDM7Q9NQW5 492 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 FAM114A2Q9NRY5 505 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 TNFRSF19Q9NS68 423 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 SIRT3Q9NTG7 399 aaPredicted RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 PIH1D1Q9NWS0 290 aaKnown RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 LYARQ9NX58 379 aaKnown RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 EHD3Q9NZN3 535 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 KLRF1Q9NZS2 232 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 NTMQ9P121 344 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 FEZ2Q9UHY8 353 aaPredicted RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 LEF1Q9UJU2 399 aaPredicted RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 DKKL1Q9UK85 242 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 MRPS33Q9Y291 106 aaKnown RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 POLR3KQ9Y2Y1 108 aaPredicted RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 HYOU1Q9Y4L1 999 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 LSM4Q9Y4Z0 139 aaKnown RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 GPC6Q9Y625 555 aaPredicted RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 AP4B1Q9Y6B7 739 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 KIAA2026Q5HYC2 2103 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 SORL1Q92673 2214 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 IQANK1A0A1B0GTG1 560 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 URADA6NGE7 173 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 TRIM49D1C9J1S8 452 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 E7EVH7 732 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 F8W8V4 182 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 hCG_2039718K7EN88 272 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 PDLIM1O00151 329 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 EIF1AYO14602 144 aaKnown RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 TNFSF11O14788 317 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 PIP5K1BO14986 540 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ZSCAN12O43309 604 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ERI3O43414 337 aaKnown RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 B3GALT2O43825 422 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 TSPAN9O75954 239 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ANXA9O76027 345 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 JTBO76095 146 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 SCELO95171 688 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 SYF2O95926 243 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms