RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 UBTD2Q8WUN7 234 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 KCTD4Q8WVF5 259 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 KAT2AQ92830 837 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 NXNL1Q96CM4 212 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 OMA1Q96E52 524 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 TSPAN17Q96FV3 270 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 COL21A1Q96P44 957 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 CPNE1Q99829 537 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 NTMT1Q9BV86 223 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 PINK1Q9BXM7 581 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 DPH5Q9H2P9 285 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 WDR41Q9HAD4 459 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 GALNT9Q9HCQ5 603 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 MYOZ1Q9NP98 299 aaPredicted RBP5.34□□□□□ -1.55
GYPB-204ENST00000504951 NSMCE4AQ9NXX6 385 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 GRHL1Q9NZI5 618 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 NUDT4Q9NZJ9 180 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 KLRF1Q9NZS2 232 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 OPTCQ9UBM4 332 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 PRODH2Q9UF12 536 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 FBXL2Q9UKC9 423 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 GPR55Q9Y2T6 319 aaPredicted RBP5.34□□□□□ -1.55
GYPB-204ENST00000504951 RNF11Q9Y3C5 154 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 ZNF337Q9Y3M9 751 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 NOTCH1P46531 2555 aa5.34□□□□□ -1.55
GYPB-204ENST00000504951 C17orf51A8MQB3 221 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 OR7A17O14581 309 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 TSPAN2O60636 221 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 BCAS2O75934 225 aaPredicted RBP5.33□□□□□ -1.56
GYPB-204ENST00000504951 PGM3O95394 542 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 S100BP04271 92 aaPredicted RBP5.33□□□□□ -1.56
GYPB-204ENST00000504951 PABPC4LP0CB38 370 aaKnown RBP5.33□□□□□ -1.56
GYPB-204ENST00000504951 PORP16435 677 aaPredicted RBP5.33□□□□□ -1.56
GYPB-204ENST00000504951 EPB42P16452 691 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 ZNF16P17020 682 aaPredicted RBP5.33□□□□□ -1.56
GYPB-204ENST00000504951 ITGA2P17301 1181 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 NT5EP21589 574 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 PCMT1P22061 227 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 GRK2P25098 689 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 NR4A2P43354 598 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 EMDP50402 254 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 RAP1GDS1P52306 607 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 ARFIP2P53365 341 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 CTBP2P56545 445 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 SIRPAP78324 504 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 BSPH1Q075Z2 132 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 SCGB2A2Q13296 93 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 ITGADQ13349 1161 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 EXOSC7Q15024 291 aaKnown RBP5.33□□□□□ -1.56
GYPB-204ENST00000504951 TAB1Q15750 504 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 PFKFB4Q16877 469 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 PRICKLE4Q2TBC4 344 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 OR52E8Q6IFG1 317 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 FAM180BQ6P0A1 224 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 FAM111BQ6SJ93 734 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 Q6ZSR9 355 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 C3orf62Q6ZUJ4 267 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 TDRPQ86YL5 185 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 CTAGE3PQ8IX95 158 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.33□□□□□ -1.56
GYPB-204ENST00000504951 C3orf56Q8N813 242 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 PPM1NQ8N819 430 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 ADCY4Q8NFM4 1077 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 SEMA6DQ8NFY4 1073 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 OR4K14Q8NGD5 310 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 OR52B6Q8NGF0 335 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 STAG3L4Q8TBR4 150 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 WDR20Q8TBZ3 569 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 TRPC4APQ8TEL6 797 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 WFDC12Q8WWY7 111 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 S100PBPQ96BU1 408 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 ADGRG7Q96K78 797 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 GPR78Q96P69 363 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 BTBD9Q96Q07 612 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 DHRS9Q9BPW9 319 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 CACNG6Q9BXT2 260 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 POTEKPQ9BYX7 375 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 ZBTB26Q9HCK0 441 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 SDHAF3Q9NRP4 125 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 EHD3Q9NZN3 535 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 FRRS1LQ9P0K9 344 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 DMGDHQ9UI17 866 aaKnown RBP5.33□□□□□ -1.56
GYPB-204ENST00000504951 ADAM29Q9UKF5 820 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 CES1P1Q9UKY3 287 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 PCNX3Q9H6A9 2034 aa5.33□□□□□ -1.56
GYPB-204ENST00000504951 PRKDCP78527 4128 aaKnown RBP5.33□□□□□ -1.56
GYPB-204ENST00000504951 LOC390937A0A1W2PQ73 354 aa5.32□□□□□ -1.56
GYPB-204ENST00000504951 CCDC189A1A4V9 331 aa5.32□□□□□ -1.56
GYPB-204ENST00000504951 OR2M5A3KFT3 312 aa5.32□□□□□ -1.56
GYPB-204ENST00000504951 C7orf72A4D263 438 aa5.32□□□□□ -1.56
GYPB-204ENST00000504951 H0YIV9 168 aa5.32□□□□□ -1.56
GYPB-204ENST00000504951 CCDC188H7C350 402 aa5.32□□□□□ -1.56
GYPB-204ENST00000504951 FOXE1O00358 373 aaPredicted RBP5.32□□□□□ -1.56
GYPB-204ENST00000504951 SMAD9O15198 467 aaKnown RBP5.32□□□□□ -1.56
GYPB-204ENST00000504951 CLOCKO15516 846 aa5.32□□□□□ -1.56
GYPB-204ENST00000504951 RAD51CO43502 376 aa5.32□□□□□ -1.56
GYPB-204ENST00000504951 UGDHO60701 494 aa5.32□□□□□ -1.56
GYPB-204ENST00000504951 SEMA3DO95025 777 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms