RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 LINC00303Q3SY05 128 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 FLYWCH1Q4VC44 716 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 RPS26P11Q5JNZ5 115 aaPredicted RBP13.83□□□□□ -0.2
GAPDH-210ENST00000496049 CCNJQ5T5M9 372 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 CLEC18BQ6UXF7 455 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 CCDC81Q6ZN84 652 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 ARMC8Q8IUR7 673 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 AQP12AQ8IXF9 295 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 DND1Q8IYX4 353 aaKnown RBP13.83□□□□□ -0.2
GAPDH-210ENST00000496049 SLC15A4Q8N697 577 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 ZNF527Q8NB42 609 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 CLEC18CQ8NCF0 446 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 OR52E4Q8NGH9 312 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 THAP3Q8WTV1 239 aaPredicted RBP13.83□□□□□ -0.2
GAPDH-210ENST00000496049 OIT3Q8WWZ8 545 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 TMBIM1Q969X1 311 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 OMA1Q96E52 524 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 THOC3Q96J01 351 aaKnown RBP13.83□□□□□ -0.2
GAPDH-210ENST00000496049 COL21A1Q96P44 957 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 SDF2Q99470 211 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 ARHGAP9Q9BRR9 750 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 HOXD1Q9GZZ0 328 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 ARMC7Q9H6L4 198 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 SEC14L3Q9UDX4 400 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 SLC13A4Q9UKG4 626 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 RRP15Q9Y3B9 282 aaKnown RBP13.83□□□□□ -0.2
GAPDH-210ENST00000496049 KCNE3Q9Y6H6 103 aa13.83□□□□□ -0.2
GAPDH-210ENST00000496049 WWP2O00308 870 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 REM1O75628 298 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 IL33O95760 270 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 ZNF682O95780 498 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 DBIP07108 87 aaKnown RBP13.82□□□□□ -0.2
GAPDH-210ENST00000496049 ITGAMP11215 1152 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 HPGDP15428 266 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 ABCD3P28288 659 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 ACTR3P61158 418 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 MS4A2Q01362 244 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 CHAF1BQ13112 559 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 KPNB1Q14974 876 aaKnown RBP13.82□□□□□ -0.2
GAPDH-210ENST00000496049 LARS2Q15031 903 aaKnown RBP13.82□□□□□ -0.2
GAPDH-210ENST00000496049 GPR68Q15743 365 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 CRB2Q5IJ48 1285 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 TYW3Q6IPR3 259 aaKnown RBP13.82□□□□□ -0.2
GAPDH-210ENST00000496049 TCTN3Q6NUS6 607 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 FRRS1Q6ZNA5 592 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 SPPL2CQ8IUH8 684 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 GOLM1Q8NBJ4 401 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 OR4N2Q8NGD1 307 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 DIO2Q92813 273 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 LHPPQ9H008 270 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 SLC38A1Q9H2H9 487 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 MTHFD2LQ9H903 347 aaPredicted RBP13.82□□□□□ -0.2
GAPDH-210ENST00000496049 OLAHQ9NV23 265 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 BAG5Q9UL15 447 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 ZNF232Q9UNY5 417 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 YARS2Q9Y2Z4 477 aaKnown RBP13.82□□□□□ -0.2
GAPDH-210ENST00000496049 IFT52Q9Y366 437 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 PCDHGA10Q9Y5H3 936 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 DSPPQ9NZW4 1301 aa13.82□□□□□ -0.2
GAPDH-210ENST00000496049 PRAMEF27A3QJZ7 478 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 ARGFXA6NJG6 315 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 A8MUI8 341 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 NKX2-8O15522 239 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 PRKNO60260 465 aaPredicted RBP13.81□□□□□ -0.2
GAPDH-210ENST00000496049 PPM1BO75688 479 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 OR2J2O76002 312 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 GPIP06744 558 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 CELA2AP08217 269 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 FAM87AP0C7U9 286 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 NAGAP17050 411 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 SSR4P51571 173 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 RPP38P78345 283 aaKnown RBP13.81□□□□□ -0.2
GAPDH-210ENST00000496049 CHRNEQ04844 493 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 SRSF6Q13247 344 aaKnown RBP13.81□□□□□ -0.2
GAPDH-210ENST00000496049 IGFBP7Q16270 282 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 MEP1AQ16819 746 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 LIN52Q52LA3 116 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 EIPR1Q53HC9 387 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 CYBRD1Q53TN4 286 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 OPN5Q6U736 354 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 RPS19BP1Q86WX3 136 aaKnown RBP13.81□□□□□ -0.2
GAPDH-210ENST00000496049 PRR22Q8IZ63 422 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 FAM26EQ8N5C1 309 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 FAM110BQ8TC76 370 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 BRIX1Q8TDN6 353 aaKnown RBP13.81□□□□□ -0.2
GAPDH-210ENST00000496049 WDR60Q8WVS4 1066 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 ASB15Q8WXK1 588 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 EXTL1Q92935 676 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 EFHD2Q96C19 240 aaPredicted RBP13.81□□□□□ -0.2
GAPDH-210ENST00000496049 ZNF354BQ96LW1 612 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 UGT2B28Q9BY64 529 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 DENND2DQ9H6A0 471 aaPredicted RBP13.81□□□□□ -0.2
GAPDH-210ENST00000496049 RUBCNLQ9H714 662 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 DCAF13Q9NV06 445 aaKnown RBP13.81□□□□□ -0.2
GAPDH-210ENST00000496049 MKLN1Q9UL63 735 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 NPFFR2Q9Y5X5 522 aa13.81□□□□□ -0.2
GAPDH-210ENST00000496049 GPC6Q9Y625 555 aaPredicted RBP13.81□□□□□ -0.2
GAPDH-210ENST00000496049 DHRS12A0PJE2 317 aa13.8□□□□□ -0.2
GAPDH-210ENST00000496049 OR6C70A6NIJ9 312 aa13.8□□□□□ -0.2
GAPDH-210ENST00000496049 SCDO00767 359 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms