RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 RGS8P57771 180 aaPredicted RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 TAS2R41P59536 307 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 IGLV3-21P80748 117 aaPredicted RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 PMS2P3Q13401 168 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 NR1D2Q14995 579 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 MAPK11Q15759 364 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 NPTX1Q15818 432 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 NEDD8Q15843 81 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 CLPPQ16740 277 aaPredicted RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 CTU2Q2VPK5 515 aaKnown RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 ENTPD8Q5MY95 495 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 SLC25A30Q5SVS4 291 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 FHL5Q5TD97 284 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 SLX4IPQ5VYV7 408 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 B3GNT8Q7Z7M8 397 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 CMIPQ8IY22 773 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 RNF113BQ8IZP6 322 aaKnown RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF619Q8N2I2 560 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 SLC43A2Q8N370 569 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 OR7G2Q8NG99 324 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 OR8J1Q8NGP2 316 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 PIGXQ8TBF5 258 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 GNPDA2Q8TDQ7 276 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 KAT2AQ92830 837 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 MUL1Q969V5 352 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 CTHRC1Q96CG8 243 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 GIMAP5Q96F15 307 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 FCRL4Q96PJ5 515 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 OR1F2PQ96R84 312 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 BARD1Q99728 777 aaKnown RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 G6PC3Q9BUM1 346 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF350Q9GZX5 532 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 GPN2Q9H9Y4 310 aaPredicted RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 EQTNQ9NQ60 294 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 SOHLH2Q9NX45 425 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 NLGN3Q9NZ94 848 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 REV1Q9UBZ9 1251 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 WARS2Q9UGM6 360 aaKnown RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 NDOR1Q9UHB4 597 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 GMEB2Q9UKD1 530 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 CFL2Q9Y281 166 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 PCDHGA6Q9Y5G7 932 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 MYOCOSA0A1B0GUC4 107 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 PRAMEF25A6NGN4 478 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 TRIM64BA6NI03 449 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 AGAP5A6NIR3 686 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 FFAR1O14842 300 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 PCDH17O14917 1159 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 PRAMEF2O60811 474 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 CNOT3O75175 753 aaKnown RBP9.32□□□□□ -0.92
PRPF3-206ENST00000493553 CYP7B1O75881 506 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 NKX2-2O95096 273 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 IL9P15248 144 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 PNLIPP16233 465 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 CCNA2P20248 432 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 TNFRSF1BP20333 461 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 PEX19P40855 299 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 YAP1P46937 504 aaKnown RBP9.32□□□□□ -0.92
PRPF3-206ENST00000493553 IDH2P48735 452 aaKnown RBP9.32□□□□□ -0.92
PRPF3-206ENST00000493553 MAZP56270 477 aaKnown RBP9.32□□□□□ -0.92
PRPF3-206ENST00000493553 POU6F2P78424 691 aaPredicted RBP9.32□□□□□ -0.92
PRPF3-206ENST00000493553 HSD11B2P80365 405 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 SHC2P98077 582 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 CHRNEQ04844 493 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 GANABQ14697 944 aaKnown RBP9.32□□□□□ -0.92
PRPF3-206ENST00000493553 DECR1Q16698 335 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 PRICKLE4Q2TBC4 344 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 SYT6Q5T7P8 510 aaPredicted RBP9.32□□□□□ -0.92
PRPF3-206ENST00000493553 RPL13AP3Q6NVV1 102 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 FAM180BQ6P0A1 224 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 C1orf94Q6P1W5 598 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 PTCHD4Q6ZW05 846 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 ENTHD1Q8IYW4 607 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 CYP4Z2PQ8N1L4 340 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 ARHGEF39Q8N4T4 335 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 OR7G1Q8NGA0 311 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 OR4K5Q8NGD3 323 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 VANGL1Q8TAA9 524 aaPredicted RBP9.32□□□□□ -0.92
PRPF3-206ENST00000493553 SLC9A6Q92581 669 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 HOXB13Q92826 284 aaPredicted RBP9.32□□□□□ -0.92
PRPF3-206ENST00000493553 OSTF1Q92882 214 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 DTNBP1Q96EV8 351 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 SLC35A4Q96G79 324 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 C16orf58Q96GQ5 468 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 SDF2Q99470 211 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 FUZQ9BT04 418 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 COPS4Q9BT78 406 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 CCDC90BQ9GZT6 254 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 NECTIN3Q9NQS3 549 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 IRAK4Q9NWZ3 460 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 MAT2BQ9NZL9 334 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 SEMA5BQ9P283 1151 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 PRODH2Q9UF12 536 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 PSORS1C1Q9UIG5 152 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 A4GNTQ9UNA3 340 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 TMEM5Q9Y2B1 443 aa9.32□□□□□ -0.92
PRPF3-206ENST00000493553 LRP4O75096 1905 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 TRBV4-1A0A0J9YWV2 114 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 SLC22A1O15245 554 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms