RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 MICU2Q8IYU8 434 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 HGDQ93099 445 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 REXO5Q96IC2 774 aaKnown RBP15.79■□□□□ 0.12
LIME1-208ENST00000493265 NODALQ96S42 347 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 QRSL1Q9H0R6 528 aaKnown RBP15.79■□□□□ 0.12
LIME1-208ENST00000493265 C1orf21Q9H246 121 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 ADNPQ9H2P0 1102 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 TMEM38AQ9H6F2 299 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 ZNF71Q9NQZ8 489 aaPredicted RBP15.79■□□□□ 0.12
LIME1-208ENST00000493265 KLHL1Q9NR64 748 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 ANGPT4Q9Y264 503 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 TP53TG5Q9Y2B4 290 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 ZNF451Q9Y4E5 1061 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 CSAG2Q9Y5P2 127 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 ELOVL7A1L3X0 281 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 PRORSD1PA6NEY8 169 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 ERICH4A6NGS2 130 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 ABCB7O75027 752 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 CCL3P10147 92 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 HPGDP15428 266 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 CD97P48960 835 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 CEACAM7Q14002 265 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 ZSCAN26Q16670 478 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.78■□□□□ 0.12
LIME1-208ENST00000493265 BICRALQ6AI39 1079 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 TYW3Q6IPR3 259 aaKnown RBP15.78■□□□□ 0.12
LIME1-208ENST00000493265 REEP3Q6NUK4 255 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 FRRS1Q6ZNA5 592 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 LRRC74BQ6ZQY2 392 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 ZADH2Q8N4Q0 377 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 OR4C3Q8NH37 302 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 TM9SF4Q92544 642 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 TMCO6Q96DC7 493 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 TREX2Q9BQ50 279 aaPredicted RBP15.78■□□□□ 0.12
LIME1-208ENST00000493265 SPATA9Q9BWV2 254 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 MFRPQ9BY79 579 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 HES7Q9BYE0 225 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 ZNF350Q9GZX5 532 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 SLC38A1Q9H2H9 487 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 METTL7AQ9H8H3 244 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 CALML5Q9NZT1 146 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 EGFL7Q9UHF1 273 aa15.78■□□□□ 0.12
LIME1-208ENST00000493265 C2orf72A6NCS6 295 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 SCO2O43819 266 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 DNAJC8O75937 253 aaPredicted RBP15.77■□□□□ 0.12
LIME1-208ENST00000493265 SORBS2O94875 1100 aaKnown RBP15.77■□□□□ 0.12
LIME1-208ENST00000493265 PGM3O95394 542 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 NCK1P16333 377 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 PCGF2P35227 344 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 PGM1P36871 562 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 DCTP40126 519 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 RBBP4Q09028 425 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 SLC22A10Q63ZE4 541 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 ERICH5Q6P6B1 374 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 ASB18Q6ZVZ8 466 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 ZNF227Q86WZ6 799 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 GPALPP1Q8IXQ4 340 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 DND1Q8IYX4 353 aaKnown RBP15.77■□□□□ 0.12
LIME1-208ENST00000493265 ZNF619Q8N2I2 560 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 GATSQ8NAP1 163 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 HIPK4Q8NE63 616 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 C9orf43Q8TAL5 461 aaPredicted RBP15.77■□□□□ 0.12
LIME1-208ENST00000493265 BBS10Q8TAM1 723 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 SPPL2AQ8TCT8 520 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 FIG4Q92562 907 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 HAS2Q92819 552 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 MCUR1Q96AQ8 359 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 ZG16BQ96DA0 208 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 TIMMDC1Q9NPL8 285 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 KLRF1Q9NZS2 232 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 TUBD1Q9UJT1 453 aa15.77■□□□□ 0.12
LIME1-208ENST00000493265 PRPF19Q9UMS4 504 aaKnown RBP15.77■□□□□ 0.12
LIME1-208ENST00000493265 A0A0G2JPF8 293 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 CENPVL1A0A0U1RR11 272 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 PRAMEF25A6NGN4 478 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 HNRNPCL2B2RXH8 293 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 HNRNPCL3B7ZW38 293 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 GSC2O15499 205 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 KIAA0513O60268 411 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 DNAJA2O60884 412 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 SLC25A12O75746 678 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 NEURL1O76050 574 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 OXSR1O95747 527 aaPredicted RBP15.76■□□□□ 0.11
LIME1-208ENST00000493265 P04436 131 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 HNRNPCL4P0DMR1 293 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 GPR85P60893 370 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 RPP38P78345 283 aaKnown RBP15.76■□□□□ 0.11
LIME1-208ENST00000493265 LACTB2Q53H82 288 aaPredicted RBP15.76■□□□□ 0.11
LIME1-208ENST00000493265 PDZK1Q5T2W1 519 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 IGFL2Q6UWQ7 119 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 MARCH3Q86UD3 253 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 PSD4Q8NDX1 1056 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 CCDC124Q96CT7 223 aaKnown RBP15.76■□□□□ 0.11
LIME1-208ENST00000493265 SGCZQ96LD1 299 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 C5orf34Q96MH7 638 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 CADM1Q9BY67 442 aaKnown RBP15.76■□□□□ 0.11
LIME1-208ENST00000493265 TBL1XR1Q9BZK7 514 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 RNF32Q9H0A6 362 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 LRMDAQ9H2I8 198 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 MTHFD2LQ9H903 347 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms