RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SNUPNO95149 360 aaKnown RBP13.9□□□□□ -0.18
CDK9-203ENST00000480353 KRT16P08779 473 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 PRPS1L1P21108 318 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 SOAT1P35610 550 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 FRKP42685 505 aaPredicted RBP13.9□□□□□ -0.18
CDK9-203ENST00000480353 ETV4P43268 484 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 LHX2P50458 406 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 DIO3P55073 304 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 ABCE1P61221 599 aaKnown RBP13.9□□□□□ -0.18
CDK9-203ENST00000480353 POU6F2P78424 691 aaPredicted RBP13.9□□□□□ -0.18
CDK9-203ENST00000480353 TP53BP2Q13625 1128 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 SNTB1Q13884 538 aaKnown RBP13.9□□□□□ -0.18
CDK9-203ENST00000480353 MLC1Q15049 377 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 PGS1Q32NB8 556 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 GRAMD1BQ3KR37 738 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 HHATQ5VTY9 493 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 PPP4R4Q6NUP7 873 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 MFSD12Q6NUT3 480 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 FIGNL1Q6PIW4 674 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 EXOC3L1Q86VI1 746 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 FADS6Q8N9I5 356 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 C9orf106Q8NAJ2 232 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 OR56A1Q8NGH5 318 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 OR5P2Q8WZ92 322 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 SMPDL3BQ92485 455 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 WNT2BQ93097 391 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 ZBTB9Q96C00 473 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 INTS12Q96CB8 462 aaKnown RBP13.9□□□□□ -0.18
CDK9-203ENST00000480353 C3orf30Q96M34 536 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 ZIM3Q96PE6 472 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 MYO9AB2RTY4 2548 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 SEC14L5O43304 696 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 ZIC3O60481 467 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 ERLIN1O75477 346 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 RCBTB2O95199 551 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 IL18BPO95998 194 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 ACP2P11117 423 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 LAMP1P11279 417 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 ZNF708P17019 499 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 SLC1A6P48664 564 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 CCT3P49368 545 aaKnown RBP13.89□□□□□ -0.19
CDK9-203ENST00000480353 ZNF41P51814 821 aaPredicted RBP13.89□□□□□ -0.19
CDK9-203ENST00000480353 KRTAP10-9P60411 292 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 RPS3AP61247 264 aaKnown RBP13.89□□□□□ -0.19
CDK9-203ENST00000480353 EEF1A1P68104 462 aaKnown RBP13.89□□□□□ -0.19
CDK9-203ENST00000480353 LASP1Q14847 261 aaKnown RBP13.89□□□□□ -0.19
CDK9-203ENST00000480353 EEF1A1P5Q5VTE0 462 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 BHLHB9Q6PI77 547 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 GATSQ8NAP1 163 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 SLC16A11Q8NCK7 471 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 ADAMTS15Q8TE58 950 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 RNF138Q8WVD3 245 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 FAM120BQ96EK7 910 aaKnown RBP13.89□□□□□ -0.19
CDK9-203ENST00000480353 C1GALT1C1Q96EU7 318 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 OTUB1Q96FW1 271 aaPredicted RBP13.89□□□□□ -0.19
CDK9-203ENST00000480353 DUSP26Q9BV47 211 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 SFXN3Q9BWM7 321 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 NEUROD4Q9HD90 331 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 RAB21Q9UL25 225 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 PCDHGB4Q9UN71 923 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 RAP2CQ9Y3L5 183 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 L3MBTL1Q9Y468 752 aa13.89□□□□□ -0.19
CDK9-203ENST00000480353 LRBAP50851 2863 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 SLC22A20A6NK97 555 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 C17orf51A8MQB3 221 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 SOX30O94993 753 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 KCNK2O95069 426 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 OXSR1O95747 527 aaPredicted RBP13.88□□□□□ -0.19
CDK9-203ENST00000480353 C6orf47O95873 294 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 HMGN2P05204 90 aaKnown RBP13.88□□□□□ -0.19
CDK9-203ENST00000480353 G6PDP11413 515 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 LCN1P31025 176 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 RPL14P50914 215 aaKnown RBP13.88□□□□□ -0.19
CDK9-203ENST00000480353 DLX5P56178 289 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 CLDN18P56856 261 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 STX3Q13277 289 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 BCL2A1Q16548 175 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 SGCBQ16585 318 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 DUSP5Q16690 384 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDK9-203ENST00000480353 OR2A2Q6IF42 318 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 LUZP2Q86TE4 346 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 MISPQ8IVT2 679 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 GCNT2Q8N0V5 402 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 ZNF781Q8N8C0 355 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 ANKRD42Q8N9B4 389 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 ZNF527Q8NB42 609 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 OR5M1Q8NGP8 315 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 MOAP1Q96BY2 351 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 C16orf58Q96GQ5 468 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 BTBD2Q9BX70 525 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 ACTRT3Q9BYD9 372 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 PRRG4Q9BZD6 226 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 BHLHE41Q9C0J9 482 aaPredicted RBP13.88□□□□□ -0.19
CDK9-203ENST00000480353 UBQLN4Q9NRR5 601 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 DNAJB12Q9NXW2 375 aaKnown RBP13.88□□□□□ -0.19
CDK9-203ENST00000480353 NTMQ9P121 344 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 EDARQ9UNE0 448 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 VDAC3Q9Y277 283 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms