RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 HBA1P69905 142 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.19■□□□□ 0.66
LIME1-204ENST00000476183 LSM12Q3MHD2 195 aaKnown RBP19.19■□□□□ 0.66
LIME1-204ENST00000476183 CCNJQ5T5M9 372 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 NSUN5P2Q63ZY6 315 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 OR4F3Q6IEY1 312 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 LACC1Q8IV20 430 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 CLECL1Q8IZS7 167 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 COX18Q8N8Q8 333 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 OR4C3Q8NH37 302 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 SFXN2Q96NB2 322 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 SPOCK3Q9BQ16 436 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 SDHAF3Q9NRP4 125 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 NKIRAS1Q9NYS0 192 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 FAM47E-STBD1D6RA91 191 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 ANGPTL1O95841 491 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 LBPP18428 481 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 MSX1P28360 303 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 GCKP35557 465 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 TIMP3P35625 211 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 PHC1P78364 1004 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 SRYQ05066 204 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 TP53BP2Q13625 1128 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 CDC73Q6P1J9 531 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 MEX3BQ6ZN04 569 aaKnown RBP19.18■□□□□ 0.66
LIME1-204ENST00000476183 OR56A1Q8NGH5 318 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 OR5AK3PQ8NH89 298 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 SFXN5Q8TD22 340 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 CDS1Q92903 461 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 TRIB1Q96RU8 372 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 STACQ99469 402 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 TUBA1CQ9BQE3 449 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 G6PC3Q9BUM1 346 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 TBL1XR1Q9BZK7 514 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 DPY30Q9C005 99 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 RUBCNLQ9H714 662 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 NEUROD4Q9HD90 331 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 DUSP22Q9NRW4 184 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 MARCOQ9UEW3 520 aaPredicted RBP19.18■□□□□ 0.66
LIME1-204ENST00000476183 KCNE3Q9Y6H6 103 aa19.18■□□□□ 0.66
LIME1-204ENST00000476183 IGLV3-32A0A0A0MS00 114 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 CD8B2A6NJW9 211 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 CFLARO15519 480 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 SCN2BO60939 215 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 OXSR1O95747 527 aaPredicted RBP19.17■□□□□ 0.66
LIME1-204ENST00000476183 ALDOCP09972 364 aaKnown RBP19.17■□□□□ 0.66
LIME1-204ENST00000476183 CLK3P49761 638 aaKnown RBP19.17■□□□□ 0.66
LIME1-204ENST00000476183 CLDN18P56856 261 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 POU6F2P78424 691 aaPredicted RBP19.17■□□□□ 0.66
LIME1-204ENST00000476183 OCRLQ01968 901 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 SPDYE7PQ495Y7 208 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 AGBL2Q5U5Z8 902 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 OGFOD2Q6N063 350 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 POMZP3Q6PJE2 187 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 ENPP6Q6UWR7 440 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 LRRC34Q8IZ02 419 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 OR8J2Q8NGG1 315 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 ZPLD1Q8TCW7 415 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 BTBD2Q9BX70 525 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 ACTRT3Q9BYD9 372 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 PIGUQ9H490 435 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 MANSC1Q9H8J5 431 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 GIN1Q9NXP7 522 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 POLQO75417 2590 aa19.17■□□□□ 0.66
LIME1-204ENST00000476183 CSMD2Q7Z408 3487 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 HSPB2A8KAH6 182 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 ALG1L2C9J202 215 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 NGFRP08138 427 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 KITP10721 976 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 HK1P19367 917 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 TBXA2RP21731 343 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 CHMP24386 653 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 ZNF136P52737 540 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 HSPB2Q16082 182 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 ATG16L1Q676U5 607 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 AAGABQ6PD74 315 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 PLXDC2Q6UX71 529 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 ADGRE4PQ86SQ3 457 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 WDR75Q8IWA0 830 aaKnown RBP19.16■□□□□ 0.66
LIME1-204ENST00000476183 CLEC4FQ8N1N0 589 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 C9orf106Q8NAJ2 232 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 RELL2Q8NC24 303 aaPredicted RBP19.16■□□□□ 0.66
LIME1-204ENST00000476183 RAB3IL1Q8TBN0 382 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 C1GALT1C1Q96EU7 318 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 DTNBP1Q96EV8 351 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 CHMP6Q96FZ7 201 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 WDR55Q9H6Y2 383 aaPredicted RBP19.16■□□□□ 0.66
LIME1-204ENST00000476183 CALHM2Q9HA72 323 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 MYO9AB2RTY4 2548 aa19.16■□□□□ 0.66
LIME1-204ENST00000476183 GOLGA8QA0A0J9YX86 632 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 GOLGA8OA6NCC3 632 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 MBD3L4A6NDZ8 208 aaPredicted RBP19.15■□□□□ 0.66
LIME1-204ENST00000476183 MBD3L3A6NE82 208 aaPredicted RBP19.15■□□□□ 0.66
LIME1-204ENST00000476183 MBD3L5A6NJ08 208 aaPredicted RBP19.15■□□□□ 0.66
LIME1-204ENST00000476183 GOLGA8NF8WBI6 632 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 H0Y3Z8 333 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 RNASET2O00584 256 aaKnown RBP19.15■□□□□ 0.66
LIME1-204ENST00000476183 HDAC3O15379 428 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 GMFGO60234 142 aa19.15■□□□□ 0.66
LIME1-204ENST00000476183 ZNF708P17019 499 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms