RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 C21orf140B9A014 251 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 HMGN4O00479 90 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 SUV39H1O43463 412 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 SLC28A2O43868 658 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 JRKO75564 520 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 TFPTP0C1Z6 253 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 HNRNPCL4P0DMR1 293 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 OR12D1P0DN82 309 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 RAP2AP10114 183 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 ETS2P15036 469 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 ITIH1P19827 911 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 ATP6V1B2P21281 511 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 RBMS1P29558 406 aaKnown RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 SLC5A2P31639 672 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 MSX2P35548 267 aaPredicted RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 CLCN2P51788 898 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 PSMD4P55036 377 aaKnown RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 RPS15P62841 145 aaKnown RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 MRPS35P82673 323 aaKnown RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 EEF1A2Q05639 463 aaKnown RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 DUSP2Q05923 314 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 MGAT2Q10469 447 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 ZNF155Q12901 538 aaPredicted RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 ERV3-1Q14264 604 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 ZNF267Q14586 743 aaPredicted RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 MYBPC3Q14896 1274 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 NCF4Q15080 339 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 RCN1Q15293 331 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 SNCBQ16143 134 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 ADRM1Q16186 407 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 ZSWIM7Q19AV6 140 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 CRB2Q5IJ48 1285 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 MLIPQ5VWP3 458 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 FBXW10Q5XX13 1052 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 HLA-DQA1Q5Y7H0 255 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 TNFAIP8L2Q6P589 184 aaPredicted RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 FAM111BQ6SJ93 734 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 RNF111Q6ZNA4 994 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 PTOV1Q86YD1 416 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 SPPL2CQ8IUH8 684 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 CLEC4FQ8N1N0 589 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 HORMAD2Q8N7B1 307 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 ENDOVQ8N8Q3 282 aaKnown RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 COX18Q8N8Q8 333 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 OR2Y1Q8NGV0 311 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 SLC38A5Q8WUX1 472 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 XAGE5Q8WWM1 108 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 HOXB13Q92826 284 aaPredicted RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 GIMAP5Q96F15 307 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 SLC46A1Q96NT5 459 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 OR7D2Q96RA2 312 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 LPAR4Q99677 370 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 CRB3Q9BUF7 120 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 CNPPD1Q9BV87 410 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 GPR87Q9BY21 358 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 VCX3BQ9H321 246 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 ARMC7Q9H6L4 198 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 EVA1AQ9H8M9 152 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 POLR1BQ9H9Y6 1135 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 CPNE5Q9HCH3 593 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 S100A14Q9HCY8 104 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 Q9N2J8 555 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 EQTNQ9NQ60 294 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 NECTIN3Q9NQS3 549 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 PNO1Q9NRX1 252 aaKnown RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 SLC22A11Q9NSA0 550 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 CCM2LQ9NUG4 571 aaPredicted RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 ARMC1Q9NVT9 282 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 CTSFQ9UBX1 484 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 C3orf18Q9UK00 162 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 BAG5Q9UL15 447 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 AP4S1Q9Y587 144 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 CLDN16Q9Y5I7 305 aa6.15□□□□□ -1.42
VAMP3-202ENST00000470357 HEMK1Q9Y5R4 338 aaPredicted RBP6.15□□□□□ -1.42
VAMP3-202ENST00000470357 SPENQ96T58 3664 aaKnown RBP6.14□□□□□ -1.43
VAMP3-202ENST00000470357 A0A1W2PS29 197 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 SAGE2PA6NJ88 616 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 STMND1H3BQB6 276 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 STX11O75558 287 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 SORBS2O94875 1100 aaKnown RBP6.14□□□□□ -1.43
VAMP3-202ENST00000470357 NKX2-2O95096 273 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 TNFSF15O95150 251 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 PGM3O95394 542 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 SERPINA1P01009 418 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 BCHEP06276 602 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 ANPEPP15144 967 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 NCK1P16333 377 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 ZNF28P17035 718 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 ITGA2P17301 1181 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 ATP6V1C1P21283 382 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 S1PR1P21453 382 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 LCN1P31025 176 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 ETV5P41161 510 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 FOLR3P41439 243 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 PPICP45877 212 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 MAN2A2P49641 1150 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 PGDP52209 483 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 PCBP3P57721 371 aaKnown RBP6.14□□□□□ -1.43
VAMP3-202ENST00000470357 SELENOWP63302 87 aa6.14□□□□□ -1.43
VAMP3-202ENST00000470357 POU6F2P78424 691 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms