RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ATE1O95260 518 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 OXSR1O95747 527 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-202ENST00000430200 ANGPTL1O95841 491 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 IFI6P09912 130 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 NUDT17P0C025 328 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 EPXP11678 715 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 IL11P20809 199 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 CPOXP36551 454 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 KIR2DL2P43627 348 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-202ENST00000430200 SLC6A8P48029 635 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 CCT5P48643 541 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 RIPPLY3P57055 190 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 SIRPAP78324 504 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 CD226Q15762 336 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 CTU2Q2VPK5 515 aaKnown RBP10.61□□□□□ -0.71
HDAC4-202ENST00000430200 FIGNL1Q6PIW4 674 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 ZNF474Q6S9Z5 364 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-202ENST00000430200 BTLAQ7Z6A9 289 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 OR7A2PQ8NGA2 310 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 OR6Y1Q8NGX8 325 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 AENQ8WTP8 325 aaKnown RBP10.61□□□□□ -0.71
HDAC4-202ENST00000430200 DUSP19Q8WTR2 217 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 SMPDL3BQ92485 455 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 ZBTB9Q96C00 473 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 PPCDCQ96CD2 204 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 STARD4Q96DR4 205 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 ARSGQ96EG1 525 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 TM9SF2Q99805 663 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 FOXC2Q99958 501 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 YIPF4Q9BSR8 244 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 C1orf50Q9BV19 199 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 PINK1Q9BXM7 581 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 REEP4Q9H6H4 257 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 ZNF395Q9H8N7 513 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-202ENST00000430200 Q9N2J8 555 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 DLL4Q9NR61 685 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 NTMQ9P121 344 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 PACSIN3Q9UKS6 424 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 VDAC3Q9Y277 283 aa10.61□□□□□ -0.71
HDAC4-202ENST00000430200 NPIPA5A0A0B4J1W7 369 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 TLDC2A0PJX2 215 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 SH3D21A4FU49 640 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 SLC22A20A6NK97 555 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 NPIPA7E9PJI5 369 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 SLC28A1O00337 649 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 SCAMP2O15127 329 aaKnown RBP10.6□□□□□ -0.71
HDAC4-202ENST00000430200 TRIM13O60858 407 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 SKAP2O75563 359 aaPredicted RBP10.6□□□□□ -0.71
HDAC4-202ENST00000430200 KCNK2O95069 426 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 CGAP01215 116 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 NPIPA8P0DM63 369 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 LAMP1P11279 417 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 NEFHP12036 1026 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 CD1EP15812 388 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 PSMA4P25789 261 aaKnown RBP10.6□□□□□ -0.71
HDAC4-202ENST00000430200 SHC1P29353 583 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 PRKAG1P54619 331 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 PRR5P85299 388 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 FAM27E3Q08E93 113 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 FOXD4Q12950 439 aaPredicted RBP10.6□□□□□ -0.71
HDAC4-202ENST00000430200 DECR1Q16698 335 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 NDUFAF6Q330K2 333 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 AAGABQ6PD74 315 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 SZRD1Q7Z422 152 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 DDIASQ8IXT1 998 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 KRTCAP2Q8N6L1 136 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 NUP43Q8NFH3 380 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 POC1BQ8TC44 478 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 FAM110BQ8TC76 370 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 TCP10LQ8TDR4 215 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 GPR151Q8TDV0 419 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 NINJ1Q92982 152 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 FAM120BQ96EK7 910 aaKnown RBP10.6□□□□□ -0.71
HDAC4-202ENST00000430200 ADGRG7Q96K78 797 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 PKNOX2Q96KN3 472 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 MARK4Q96L34 752 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 ZFP3Q96NJ6 502 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 MS4A4EQ96PG1 132 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 SERHL2Q9H4I8 314 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 RNF122Q9H9V4 155 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 PPCSQ9HAB8 311 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 SLC24A3Q9HC58 644 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.6□□□□□ -0.71
HDAC4-202ENST00000430200 FOXD3Q9UJU5 478 aaPredicted RBP10.6□□□□□ -0.71
HDAC4-202ENST00000430200 KCNE3Q9Y6H6 103 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 V9GYY5 206 aaPredicted RBP10.6□□□□□ -0.71
HDAC4-202ENST00000430200 TLN2Q9Y4G6 2542 aa10.6□□□□□ -0.71
HDAC4-202ENST00000430200 ARID1AO14497 2285 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 CENPVL1A0A0U1RR11 272 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 DEFB108AA8MXU0 73 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 H3BQF6 201 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 RGS14O43566 566 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 TYROBPO43914 113 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 NPHS1O60500 1241 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 LYPLA1O75608 230 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-202ENST00000430200 SMNDC1O75940 238 aaKnown RBP eCLIP10.59□□□□□ -0.71
HDAC4-202ENST00000430200 C1QCP02747 245 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 OPN1LWP04000 364 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 PRPS2P11908 318 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 LOXP28300 417 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms