RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 TP53I3Q53FA7 332 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 BCL2L15Q5TBC7 163 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 VDAC3Q9Y277 283 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 KCNIP3Q9Y2W7 256 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 OR7A17O14581 309 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 SFTPBP07988 381 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 SRYQ05066 204 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 SEMA3BQ13214 749 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 RPE65Q16518 533 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 LINC01465Q8N7H1 131 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 OR5K2Q8NHB8 316 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 NDNFQ8TB73 568 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 KATNBL1Q9H079 304 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 PCDHGA8Q9Y5G5 932 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 A0A1W2PQL4 384 aaPredicted RBP17.12■□□□□ 0.33
COL18A1-204ENST00000400337 BCAS1O75363 584 aaPredicted RBP17.12■□□□□ 0.33
COL18A1-204ENST00000400337 OR7A10O76100 309 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 TOXO94900 526 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 ATE1O95260 518 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 SOX3P41225 446 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 PPP5CP53041 499 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 EMP2P54851 167 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 SYPL1Q16563 259 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 PLAG1Q6DJT9 500 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 BEND4Q6ZU67 534 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 B3GNT7Q8NFL0 401 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 ABHD11Q8NFV4 315 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 ARRDC3Q96B67 414 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 SLC25A44Q96H78 314 aaPredicted RBP17.12■□□□□ 0.33
COL18A1-204ENST00000400337 UHRF1Q96T88 793 aaPredicted RBP17.12■□□□□ 0.33
COL18A1-204ENST00000400337 H3BMQ9 156 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 PNMTP11086 282 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 AMY2BP19961 511 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 MGAT3Q09327 533 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 RAB11BQ15907 218 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 SLC35F2Q8IXU6 374 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 COG8Q96MW5 612 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 MEN1O00255 615 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 NARSO43776 548 aaKnown RBP17.12■□□□□ 0.33
COL18A1-204ENST00000400337 IMPA1P29218 277 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 GNRHRP30968 328 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 HES5Q5TA89 166 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 PRAMEF8Q5VWM4 474 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 PRAMEF7Q5VXH5 474 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 RETREG3Q86VR2 466 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 ANKRD13BQ86YJ7 626 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 SDR9C7Q8NEX9 313 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 MYH4Q9Y623 1939 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 NUDT7P0C024 238 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 TNFRSF4P43489 277 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 FAM76BQ5HYJ3 339 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 IGFN1Q86VF2 1251 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 OR7D2Q96RA2 312 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 WDR37Q9Y2I8 494 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 C4AP0C0L4 1744 aa17.12■□□□□ 0.33
COL18A1-204ENST00000400337 FNTBP49356 437 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 CDK10Q15131 360 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 HORMAD2Q8N7B1 307 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 UBL4AP11441 157 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 SNU13P55769 128 aaKnown RBP17.11■□□□□ 0.33
COL18A1-204ENST00000400337 TMEM184AQ6ZMB5 413 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 RTN4RL1Q86UN2 441 aaPredicted RBP17.11■□□□□ 0.33
COL18A1-204ENST00000400337 VRK2Q86Y07 508 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 SYT14Q8NB59 555 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 FAM46BQ96A09 425 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 ZBP1Q9H171 429 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 OR10A4Q9H209 315 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 RPH3AQ9Y2J0 694 aaPredicted RBP17.11■□□□□ 0.33
COL18A1-204ENST00000400337 CACNA1SQ13698 1873 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 C17orf113A0A1B0GUU1 675 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 PRKXP51817 358 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 ZMYND11Q15326 602 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 ZNF765Q7L2R6 523 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 TIGD4Q8IY51 512 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 LAS2Q8IYD9 372 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 SPARTQ8N0X7 666 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 MAB21L2Q9Y586 359 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 A0A1B0GVC2 190 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 MFSD13AQ14CX5 517 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 SFRP4Q6FHJ7 346 aaPredicted RBP17.11■□□□□ 0.33
COL18A1-204ENST00000400337 DCDC5Q6ZRR9 648 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 OR2T11Q8NH01 316 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 CACNG6Q9BXT2 260 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 SAP130Q9H0E3 1048 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 PRSS16Q9NQE7 514 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 TAAR2Q9P1P5 351 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 USP22Q9UPT9 525 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 A6NLC8 198 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 GM2AP17900 193 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 CD6P30203 668 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 SLC6A8P48029 635 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 NKX3-2P78367 333 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 METTL4Q8N3J2 472 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 GATA6Q92908 595 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 BPIFA2Q96DR5 249 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 LMF1Q96S06 567 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 ADOQ96SZ5 270 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 CCDC32Q9BV29 185 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 NLKQ9UBE8 527 aa17.11■□□□□ 0.33
COL18A1-204ENST00000400337 RNF215Q9Y6U7 377 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms